Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ASIC1P78348 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.16■□□□□ 0.34
ASIC1P78348 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ASIC1P78348 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.16■□□□□ 0.34
ASIC1P78348 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ASIC1P78348 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.16■□□□□ 0.34
ASIC1P78348 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ASIC1P78348 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.16■□□□□ 0.34
ASIC1P78348 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ASIC1P78348 SPDYE19P-201ENST00000338590 713 ntBASIC17.16■□□□□ 0.34
ASIC1P78348 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ASIC1P78348 AC104457.1-201ENST00000401024 814 ntBASIC17.16■□□□□ 0.34
ASIC1P78348 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.16■□□□□ 0.34
ASIC1P78348 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.16■□□□□ 0.34
ASIC1P78348 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ASIC1P78348 INGX-202ENST00000489074 768 ntBASIC17.16■□□□□ 0.34
ASIC1P78348 RARRES2P5-201ENST00000564013 466 ntBASIC17.16■□□□□ 0.34
ASIC1P78348 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.16■□□□□ 0.34
ASIC1P78348 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.16■□□□□ 0.34
ASIC1P78348 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.16■□□□□ 0.34
ASIC1P78348 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.16■□□□□ 0.34
ASIC1P78348 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ASIC1P78348 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.16■□□□□ 0.34
ASIC1P78348 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.16■□□□□ 0.34
ASIC1P78348 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ASIC1P78348 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ASIC1P78348 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ASIC1P78348 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ASIC1P78348 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
ASIC1P78348 AC106881.1-201ENST00000605849 3329 ntBASIC17.16■□□□□ 0.34
ASIC1P78348 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ASIC1P78348 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ASIC1P78348 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ASIC1P78348 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ASIC1P78348 CICP23-201ENST00000605013 2741 ntBASIC17.15■□□□□ 0.34
ASIC1P78348 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.15■□□□□ 0.34
ASIC1P78348 GNAQP1-201ENST00000444815 1067 ntBASIC17.15■□□□□ 0.34
ASIC1P78348 FAM86LP-201ENST00000478302 853 ntBASIC17.15■□□□□ 0.34
ASIC1P78348 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.15■□□□□ 0.34
ASIC1P78348 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.15■□□□□ 0.34
ASIC1P78348 RNA5SP421-201ENST00000516864 134 ntBASIC17.15■□□□□ 0.34
ASIC1P78348 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.15■□□□□ 0.34
ASIC1P78348 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.15■□□□□ 0.34
ASIC1P78348 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.15■□□□□ 0.34
ASIC1P78348 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.15■□□□□ 0.34
ASIC1P78348 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ASIC1P78348 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.15■□□□□ 0.34
ASIC1P78348 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.15■□□□□ 0.34
ASIC1P78348 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.15■□□□□ 0.34
ASIC1P78348 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.15■□□□□ 0.34
ASIC1P78348 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 AC013726.1-201ENST00000563747 2285 ntBASIC17.15■□□□□ 0.34
ASIC1P78348 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ASIC1P78348 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ASIC1P78348 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ASIC1P78348 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ASIC1P78348 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ASIC1P78348 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.14■□□□□ 0.34
ASIC1P78348 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ASIC1P78348 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ASIC1P78348 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.14■□□□□ 0.34
ASIC1P78348 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
ASIC1P78348 LINC01101-201ENST00000622953 1884 ntBASIC17.14■□□□□ 0.33
ASIC1P78348 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ASIC1P78348 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.14■□□□□ 0.33
ASIC1P78348 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.14■□□□□ 0.33
ASIC1P78348 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 UGT1A2P-201ENST00000454886 866 ntBASIC17.14■□□□□ 0.33
ASIC1P78348 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.14■□□□□ 0.33
ASIC1P78348 SAMD11P1-201ENST00000571429 661 ntBASIC17.14■□□□□ 0.33
ASIC1P78348 AC027796.2-201ENST00000575326 344 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms