Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC139749.1-202ENST00000617529 3139 ntBASIC14.33□□□□□ -0.12
PER3P56645 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PER3P56645 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PER3P56645 AL603832.2-201ENST00000566195 2125 ntBASIC14.33□□□□□ -0.12
PER3P56645 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PER3P56645 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PER3P56645 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PER3P56645 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PER3P56645 AC020907.1-201ENST00000616460 1350 ntBASIC14.33□□□□□ -0.12
PER3P56645 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PER3P56645 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PER3P56645 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PER3P56645 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PER3P56645 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
PER3P56645 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PER3P56645 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.32□□□□□ -0.12
PER3P56645 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.32□□□□□ -0.12
PER3P56645 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.32□□□□□ -0.12
PER3P56645 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PER3P56645 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PER3P56645 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PER3P56645 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.32□□□□□ -0.12
PER3P56645 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.32□□□□□ -0.12
PER3P56645 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.32□□□□□ -0.12
PER3P56645 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.32□□□□□ -0.12
PER3P56645 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.32□□□□□ -0.12
PER3P56645 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.32□□□□□ -0.12
PER3P56645 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.32□□□□□ -0.12
PER3P56645 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.32□□□□□ -0.12
PER3P56645 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.32□□□□□ -0.12
PER3P56645 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.32□□□□□ -0.12
PER3P56645 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.32□□□□□ -0.12
PER3P56645 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.32□□□□□ -0.12
PER3P56645 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.32□□□□□ -0.12
PER3P56645 AC133539.2-201ENST00000604757 467 ntBASIC14.32□□□□□ -0.12
PER3P56645 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PER3P56645 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.32□□□□□ -0.12
PER3P56645 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PER3P56645 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PER3P56645 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.32□□□□□ -0.12
PER3P56645 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PER3P56645 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 KRT8P22-201ENST00000562317 1415 ntBASIC14.32□□□□□ -0.12
PER3P56645 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PER3P56645 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PER3P56645 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PER3P56645 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PER3P56645 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PER3P56645 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.31□□□□□ -0.12
PER3P56645 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.31□□□□□ -0.12
PER3P56645 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PER3P56645 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PER3P56645 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.31□□□□□ -0.12
PER3P56645 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
PER3P56645 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PER3P56645 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PER3P56645 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PER3P56645 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.31□□□□□ -0.12
PER3P56645 FO393414.2-201ENST00000405153 598 ntBASIC14.31□□□□□ -0.12
PER3P56645 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PER3P56645 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.31□□□□□ -0.12
PER3P56645 AL589987.1-201ENST00000453380 819 ntBASIC14.31□□□□□ -0.12
PER3P56645 RNA5SP412-201ENST00000516234 123 ntBASIC14.31□□□□□ -0.12
PER3P56645 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.31□□□□□ -0.12
PER3P56645 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.31□□□□□ -0.12
PER3P56645 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms