Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CDKN2DP55273 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 DRD5P1-201ENST00000456605 1438 ntBASIC15.17■□□□□ 0.02
CDKN2DP55273 AL360270.3-201ENST00000609118 1348 ntBASIC15.17■□□□□ 0.02
CDKN2DP55273 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKN2DP55273 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CDKN2DP55273 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKN2DP55273 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 AC140479.7-201ENST00000636301 2332 ntBASIC15.16■□□□□ 0.02
CDKN2DP55273 AC007787.1-201ENST00000588095 1583 ntBASIC15.16■□□□□ 0.02
CDKN2DP55273 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKN2DP55273 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKN2DP55273 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 MTHFR-210ENST00000641407 2387 ntBASIC15.16■□□□□ 0.02
CDKN2DP55273 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKN2DP55273 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.16■□□□□ 0.02
CDKN2DP55273 BASP1P1-201ENST00000430708 665 ntBASIC15.16■□□□□ 0.02
CDKN2DP55273 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 FAM86LP-201ENST00000478302 853 ntBASIC15.16■□□□□ 0.02
CDKN2DP55273 DOC2GP-202ENST00000514950 1163 ntBASIC15.16■□□□□ 0.02
CDKN2DP55273 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKN2DP55273 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
CDKN2DP55273 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.16■□□□□ 0.02
CDKN2DP55273 RARRES2P5-201ENST00000564013 466 ntBASIC15.16■□□□□ 0.02
CDKN2DP55273 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKN2DP55273 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.16■□□□□ 0.02
CDKN2DP55273 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.16■□□□□ 0.02
CDKN2DP55273 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDKN2DP55273 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDKN2DP55273 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CDKN2DP55273 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKN2DP55273 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CDKN2DP55273 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CDKN2DP55273 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKN2DP55273 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.16■□□□□ 0.02
CDKN2DP55273 AC063926.3-201ENST00000624734 5658 ntBASIC15.16■□□□□ 0.02
CDKN2DP55273 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDKN2DP55273 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKN2DP55273 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKN2DP55273 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CDKN2DP55273 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
CDKN2DP55273 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDKN2DP55273 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKN2DP55273 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDKN2DP55273 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDKN2DP55273 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKN2DP55273 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 SPDYE19P-201ENST00000338590 713 ntBASIC15.15■□□□□ 0.02
CDKN2DP55273 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CDKN2DP55273 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKN2DP55273 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 GNAQP1-201ENST00000444815 1067 ntBASIC15.15■□□□□ 0.02
CDKN2DP55273 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKN2DP55273 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKN2DP55273 AC004066.1-201ENST00000502488 802 ntBASIC15.15■□□□□ 0.02
CDKN2DP55273 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKN2DP55273 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.15■□□□□ 0.02
CDKN2DP55273 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKN2DP55273 TPRX2P-201ENST00000535362 881 ntBASIC15.15■□□□□ 0.02
CDKN2DP55273 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKN2DP55273 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKN2DP55273 AC036164.1-201ENST00000570544 333 ntBASIC15.15■□□□□ 0.02
CDKN2DP55273 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CDKN2DP55273 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 AL662799.1-202ENST00000614205 422 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms