Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.36□□□□□ -0.11
PSMD4P55036 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PSMD4P55036 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PSMD4P55036 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.36□□□□□ -0.11
PSMD4P55036 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 LINC02228-204ENST00000642115 2962 ntBASIC14.36□□□□□ -0.11
PSMD4P55036 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PSMD4P55036 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PSMD4P55036 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.36□□□□□ -0.11
PSMD4P55036 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.36□□□□□ -0.11
PSMD4P55036 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
PSMD4P55036 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.36□□□□□ -0.11
PSMD4P55036 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 AL391825.1-201ENST00000457671 1364 ntBASIC14.35□□□□□ -0.11
PSMD4P55036 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.35□□□□□ -0.11
PSMD4P55036 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PSMD4P55036 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
PSMD4P55036 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.35□□□□□ -0.11
PSMD4P55036 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
PSMD4P55036 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PSMD4P55036 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PSMD4P55036 AC126335.2-201ENST00000623362 4637 ntBASIC14.35□□□□□ -0.11
PSMD4P55036 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PSMD4P55036 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PSMD4P55036 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.35□□□□□ -0.11
PSMD4P55036 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PSMD4P55036 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PSMD4P55036 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PSMD4P55036 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PSMD4P55036 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PSMD4P55036 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.35□□□□□ -0.11
PSMD4P55036 AC104596.2-201ENST00000512793 793 ntBASIC14.35□□□□□ -0.11
PSMD4P55036 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.35□□□□□ -0.11
PSMD4P55036 SPCS2P1-201ENST00000561636 679 ntBASIC14.35□□□□□ -0.11
PSMD4P55036 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.35□□□□□ -0.11
PSMD4P55036 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.35□□□□□ -0.11
PSMD4P55036 AL355385.1-201ENST00000606123 409 ntBASIC14.35□□□□□ -0.11
PSMD4P55036 AC004233.3-201ENST00000607794 1269 ntBASIC14.35□□□□□ -0.11
PSMD4P55036 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.35□□□□□ -0.11
PSMD4P55036 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.35□□□□□ -0.11
PSMD4P55036 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
PSMD4P55036 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PSMD4P55036 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PSMD4P55036 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PSMD4P55036 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PSMD4P55036 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.35□□□□□ -0.11
PSMD4P55036 WASH3P-207ENST00000560956 1394 ntBASIC14.34□□□□□ -0.11
PSMD4P55036 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PSMD4P55036 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PSMD4P55036 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PSMD4P55036 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PSMD4P55036 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
PSMD4P55036 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.34□□□□□ -0.11
PSMD4P55036 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
PSMD4P55036 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.34□□□□□ -0.11
PSMD4P55036 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 AP002414.2-201ENST00000591780 3365 ntBASIC14.34□□□□□ -0.11
PSMD4P55036 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.34□□□□□ -0.11
PSMD4P55036 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.34□□□□□ -0.11
PSMD4P55036 AC087499.6-201ENST00000411576 835 ntBASIC14.34□□□□□ -0.11
PSMD4P55036 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 SPDYE18-201ENST00000510091 1050 ntBASIC14.34□□□□□ -0.11
PSMD4P55036 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.34□□□□□ -0.11
PSMD4P55036 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.34□□□□□ -0.11
PSMD4P55036 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.34□□□□□ -0.11
PSMD4P55036 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.34□□□□□ -0.11
PSMD4P55036 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.34□□□□□ -0.11
PSMD4P55036 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.34□□□□□ -0.11
PSMD4P55036 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.34□□□□□ -0.11
PSMD4P55036 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PSMD4P55036 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.34□□□□□ -0.11
PSMD4P55036 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PSMD4P55036 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
PSMD4P55036 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.34□□□□□ -0.11
PSMD4P55036 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms