Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
GRIK1P39086 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GRIK1P39086 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GRIK1P39086 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
GRIK1P39086 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GRIK1P39086 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.16■□□□□ 0.18
GRIK1P39086 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.16■□□□□ 0.18
GRIK1P39086 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.16■□□□□ 0.18
GRIK1P39086 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.16■□□□□ 0.18
GRIK1P39086 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.16■□□□□ 0.18
GRIK1P39086 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.16■□□□□ 0.18
GRIK1P39086 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.16■□□□□ 0.18
GRIK1P39086 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.16■□□□□ 0.18
GRIK1P39086 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 AC136621.1-201ENST00000624017 2304 ntBASIC16.16■□□□□ 0.18
GRIK1P39086 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.16■□□□□ 0.18
GRIK1P39086 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.16■□□□□ 0.18
GRIK1P39086 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.16■□□□□ 0.18
GRIK1P39086 ACTBP8-201ENST00000403258 1108 ntBASIC16.16■□□□□ 0.18
GRIK1P39086 AL139094.1-201ENST00000405549 1188 ntBASIC16.16■□□□□ 0.18
GRIK1P39086 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GRIK1P39086 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.16■□□□□ 0.18
GRIK1P39086 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.16■□□□□ 0.18
GRIK1P39086 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.16■□□□□ 0.18
GRIK1P39086 AP000812.2-201ENST00000538934 718 ntBASIC16.16■□□□□ 0.18
GRIK1P39086 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
GRIK1P39086 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.16■□□□□ 0.18
GRIK1P39086 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
GRIK1P39086 AC025279.2-201ENST00000569730 653 ntBASIC16.16■□□□□ 0.18
GRIK1P39086 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.16■□□□□ 0.18
GRIK1P39086 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.16■□□□□ 0.18
GRIK1P39086 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.16■□□□□ 0.18
GRIK1P39086 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.16■□□□□ 0.18
GRIK1P39086 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
GRIK1P39086 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GRIK1P39086 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.16■□□□□ 0.18
GRIK1P39086 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
GRIK1P39086 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.16■□□□□ 0.18
GRIK1P39086 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GRIK1P39086 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.15■□□□□ 0.18
GRIK1P39086 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.15■□□□□ 0.18
GRIK1P39086 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.15■□□□□ 0.18
GRIK1P39086 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.15■□□□□ 0.18
GRIK1P39086 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.15■□□□□ 0.18
GRIK1P39086 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
GRIK1P39086 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
GRIK1P39086 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
GRIK1P39086 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.15■□□□□ 0.18
GRIK1P39086 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.15■□□□□ 0.18
GRIK1P39086 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.15■□□□□ 0.18
GRIK1P39086 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.15■□□□□ 0.18
GRIK1P39086 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.15■□□□□ 0.18
GRIK1P39086 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
GRIK1P39086 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
GRIK1P39086 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
GRIK1P39086 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GRIK1P39086 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms