Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 AC008687.7-202ENST00000637404 953 ntBASIC13.15□□□□□ -0.3
CDKN1AP38936 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
CDKN1AP38936 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN1AP38936 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CDKN1AP38936 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CDKN1AP38936 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.15□□□□□ -0.3
CDKN1AP38936 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN1AP38936 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.15□□□□□ -0.3
CDKN1AP38936 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.15□□□□□ -0.3
CDKN1AP38936 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN1AP38936 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CDKN1AP38936 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN1AP38936 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN1AP38936 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.15□□□□□ -0.3
CDKN1AP38936 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CDKN1AP38936 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
CDKN1AP38936 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.31
CDKN1AP38936 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.15□□□□□ -0.31
CDKN1AP38936 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CDKN1AP38936 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.14□□□□□ -0.31
CDKN1AP38936 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.14□□□□□ -0.31
CDKN1AP38936 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.14□□□□□ -0.31
CDKN1AP38936 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.14□□□□□ -0.31
CDKN1AP38936 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CDKN1AP38936 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.14□□□□□ -0.31
CDKN1AP38936 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.14□□□□□ -0.31
CDKN1AP38936 MIR326-201ENST00000362220 95 ntBASIC13.14□□□□□ -0.31
CDKN1AP38936 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.14□□□□□ -0.31
CDKN1AP38936 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.14□□□□□ -0.31
CDKN1AP38936 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.14□□□□□ -0.31
CDKN1AP38936 CNN2P8-201ENST00000421872 913 ntBASIC13.14□□□□□ -0.31
CDKN1AP38936 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CDKN1AP38936 AL590640.2-201ENST00000457038 527 ntBASIC13.14□□□□□ -0.31
CDKN1AP38936 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.14□□□□□ -0.31
CDKN1AP38936 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.14□□□□□ -0.31
CDKN1AP38936 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CDKN1AP38936 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
CDKN1AP38936 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CDKN1AP38936 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.14□□□□□ -0.31
CDKN1AP38936 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CDKN1AP38936 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.14□□□□□ -0.31
CDKN1AP38936 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN1AP38936 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
CDKN1AP38936 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
CDKN1AP38936 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CDKN1AP38936 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
CDKN1AP38936 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CDKN1AP38936 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CDKN1AP38936 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.13□□□□□ -0.31
CDKN1AP38936 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
CDKN1AP38936 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CDKN1AP38936 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.13□□□□□ -0.31
CDKN1AP38936 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
CDKN1AP38936 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.13□□□□□ -0.31
CDKN1AP38936 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.13□□□□□ -0.31
CDKN1AP38936 DUX4L45-201ENST00000566406 1057 ntBASIC13.13□□□□□ -0.31
CDKN1AP38936 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms