Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.14■□□□□ 0.01
SOX11P35716 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
SOX11P35716 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
SOX11P35716 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 LINC00528-201ENST00000600723 2160 ntBASIC15.14■□□□□ 0.01
SOX11P35716 LINC00552-201ENST00000625151 2579 ntBASIC15.14■□□□□ 0.01
SOX11P35716 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.14■□□□□ 0.01
SOX11P35716 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.14■□□□□ 0.01
SOX11P35716 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.14■□□□□ 0.01
SOX11P35716 MRPS18AP1-201ENST00000414458 589 ntBASIC15.14■□□□□ 0.01
SOX11P35716 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.14■□□□□ 0.01
SOX11P35716 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC15.14■□□□□ 0.01
SOX11P35716 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.14■□□□□ 0.01
SOX11P35716 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.14■□□□□ 0.01
SOX11P35716 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC15.14■□□□□ 0.01
SOX11P35716 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.14■□□□□ 0.01
SOX11P35716 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
SOX11P35716 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.14■□□□□ 0.01
SOX11P35716 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SOX11P35716 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.14■□□□□ 0.01
SOX11P35716 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
SOX11P35716 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SOX11P35716 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.14■□□□□ 0.01
SOX11P35716 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SOX11P35716 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SOX11P35716 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.14■□□□□ 0.01
SOX11P35716 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.14■□□□□ 0.01
SOX11P35716 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SOX11P35716 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
SOX11P35716 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.13■□□□□ 0.01
SOX11P35716 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SOX11P35716 INTS4P1-203ENST00000641008 3683 ntBASIC15.13■□□□□ 0.01
SOX11P35716 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SOX11P35716 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SOX11P35716 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SOX11P35716 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SOX11P35716 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.13■□□□□ 0.01
SOX11P35716 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SOX11P35716 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SOX11P35716 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SOX11P35716 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.13■□□□□ 0.01
SOX11P35716 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.13■□□□□ 0.01
SOX11P35716 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.13■□□□□ 0.01
SOX11P35716 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SOX11P35716 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.13■□□□□ 0.01
SOX11P35716 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.13■□□□□ 0.01
SOX11P35716 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.13■□□□□ 0.01
SOX11P35716 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.13■□□□□ 0.01
SOX11P35716 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.13■□□□□ 0.01
SOX11P35716 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.13■□□□□ 0.01
SOX11P35716 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.13■□□□□ 0.01
SOX11P35716 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SOX11P35716 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.13■□□□□ 0.01
SOX11P35716 AGAP7P-201ENST00000582299 2062 ntBASIC15.13■□□□□ 0.01
SOX11P35716 AGAP14-201ENST00000624701 2060 ntBASIC15.13■□□□□ 0.01
SOX11P35716 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SOX11P35716 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.13■□□□□ 0.01
SOX11P35716 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms