Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CTNNA1P35221 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CTNNA1P35221 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.29■□□□□ 0.2
CTNNA1P35221 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.29■□□□□ 0.2
CTNNA1P35221 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
CTNNA1P35221 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.29■□□□□ 0.2
CTNNA1P35221 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CTNNA1P35221 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CTNNA1P35221 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.28■□□□□ 0.2
CTNNA1P35221 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.28■□□□□ 0.2
CTNNA1P35221 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CTNNA1P35221 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CTNNA1P35221 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CTNNA1P35221 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.28■□□□□ 0.2
CTNNA1P35221 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CTNNA1P35221 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CTNNA1P35221 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.28■□□□□ 0.2
CTNNA1P35221 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.28■□□□□ 0.2
CTNNA1P35221 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.28■□□□□ 0.2
CTNNA1P35221 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.28■□□□□ 0.2
CTNNA1P35221 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.28■□□□□ 0.2
CTNNA1P35221 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.28■□□□□ 0.2
CTNNA1P35221 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.28■□□□□ 0.2
CTNNA1P35221 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.28■□□□□ 0.2
CTNNA1P35221 AP001059.3-201ENST00000619053 235 ntBASIC16.28■□□□□ 0.2
CTNNA1P35221 MIR6069-201ENST00000620069 79 ntBASIC16.28■□□□□ 0.2
CTNNA1P35221 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CTNNA1P35221 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.28■□□□□ 0.2
CTNNA1P35221 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.28■□□□□ 0.2
CTNNA1P35221 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CTNNA1P35221 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.28■□□□□ 0.2
CTNNA1P35221 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTNNA1P35221 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.28■□□□□ 0.2
CTNNA1P35221 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.27■□□□□ 0.2
CTNNA1P35221 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CTNNA1P35221 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.27■□□□□ 0.2
CTNNA1P35221 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.27■□□□□ 0.2
CTNNA1P35221 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.27■□□□□ 0.2
CTNNA1P35221 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.27■□□□□ 0.2
CTNNA1P35221 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CTNNA1P35221 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 AL133267.1-201ENST00000398220 340 ntBASIC16.27■□□□□ 0.2
CTNNA1P35221 KRT18P64-201ENST00000434946 1219 ntBASIC16.27■□□□□ 0.2
CTNNA1P35221 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.27■□□□□ 0.2
CTNNA1P35221 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CTNNA1P35221 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTNNA1P35221 AC025048.3-201ENST00000590609 569 ntBASIC16.27■□□□□ 0.2
CTNNA1P35221 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms