Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.46■□□□□ 0.23
HOXC8P31273 GCOM2-201ENST00000509133 1104 ntBASIC16.46■□□□□ 0.23
HOXC8P31273 AC131206.1-201ENST00000538078 1211 ntBASIC16.46■□□□□ 0.23
HOXC8P31273 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.46■□□□□ 0.23
HOXC8P31273 MIR4722-201ENST00000578292 60 ntBASIC16.46■□□□□ 0.23
HOXC8P31273 AL133499.1-201ENST00000596207 608 ntBASIC16.46■□□□□ 0.23
HOXC8P31273 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.46■□□□□ 0.23
HOXC8P31273 AL353770.1-201ENST00000614915 403 ntBASIC16.46■□□□□ 0.23
HOXC8P31273 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HOXC8P31273 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HOXC8P31273 AL157791.1-201ENST00000553667 1699 ntBASIC16.46■□□□□ 0.23
HOXC8P31273 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HOXC8P31273 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
HOXC8P31273 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
HOXC8P31273 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
HOXC8P31273 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXC8P31273 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HOXC8P31273 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 MBLAC2-202ENST00000514906 1936 ntBASIC16.45■□□□□ 0.22
HOXC8P31273 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXC8P31273 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
HOXC8P31273 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXC8P31273 C18orf15-201ENST00000623680 2534 ntBASIC16.45■□□□□ 0.22
HOXC8P31273 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
HOXC8P31273 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXC8P31273 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.45■□□□□ 0.22
HOXC8P31273 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXC8P31273 HINT2P1-201ENST00000419438 481 ntBASIC16.45■□□□□ 0.22
HOXC8P31273 ISCA2P1-201ENST00000425548 448 ntBASIC16.45■□□□□ 0.22
HOXC8P31273 PDIA3P2-201ENST00000428073 158 ntBASIC16.45■□□□□ 0.22
HOXC8P31273 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.45■□□□□ 0.22
HOXC8P31273 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.45■□□□□ 0.22
HOXC8P31273 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.45■□□□□ 0.22
HOXC8P31273 TMEM198B-204ENST00000484016 896 ntBASIC16.45■□□□□ 0.22
HOXC8P31273 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXC8P31273 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.45■□□□□ 0.22
HOXC8P31273 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.45■□□□□ 0.22
HOXC8P31273 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.45■□□□□ 0.22
HOXC8P31273 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.45■□□□□ 0.22
HOXC8P31273 MIR4706-201ENST00000582134 82 ntBASIC16.45■□□□□ 0.22
HOXC8P31273 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.45■□□□□ 0.22
HOXC8P31273 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HOXC8P31273 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HOXC8P31273 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.45■□□□□ 0.22
HOXC8P31273 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
HOXC8P31273 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
HOXC8P31273 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.44■□□□□ 0.22
HOXC8P31273 REXO1L2P-201ENST00000425429 2069 ntBASIC16.44■□□□□ 0.22
HOXC8P31273 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC8P31273 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC8P31273 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC8P31273 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC8P31273 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC8P31273 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC8P31273 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC8P31273 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC8P31273 FXNP2-201ENST00000411625 547 ntBASIC16.44■□□□□ 0.22
HOXC8P31273 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.44■□□□□ 0.22
HOXC8P31273 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.44■□□□□ 0.22
HOXC8P31273 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.44■□□□□ 0.22
HOXC8P31273 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC8P31273 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.44■□□□□ 0.22
HOXC8P31273 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
HOXC8P31273 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC8P31273 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC8P31273 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.44■□□□□ 0.22
HOXC8P31273 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.44■□□□□ 0.22
HOXC8P31273 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.44■□□□□ 0.22
HOXC8P31273 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.44■□□□□ 0.22
HOXC8P31273 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC8P31273 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.44■□□□□ 0.22
HOXC8P31273 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms