Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.85□□□□□ -0.03
CAPN3P20807 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CAPN3P20807 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.85□□□□□ -0.03
CAPN3P20807 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.85□□□□□ -0.03
CAPN3P20807 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CAPN3P20807 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.85□□□□□ -0.03
CAPN3P20807 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.85□□□□□ -0.03
CAPN3P20807 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.85□□□□□ -0.03
CAPN3P20807 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 AL512638.1-201ENST00000457493 794 ntBASIC14.85□□□□□ -0.03
CAPN3P20807 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.85□□□□□ -0.03
CAPN3P20807 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CAPN3P20807 LINC02560-201ENST00000596379 459 ntBASIC14.85□□□□□ -0.03
CAPN3P20807 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.85□□□□□ -0.03
CAPN3P20807 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CAPN3P20807 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CAPN3P20807 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.85□□□□□ -0.03
CAPN3P20807 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.85□□□□□ -0.03
CAPN3P20807 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CAPN3P20807 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.85□□□□□ -0.03
CAPN3P20807 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.84□□□□□ -0.03
CAPN3P20807 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.84□□□□□ -0.03
CAPN3P20807 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CAPN3P20807 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CAPN3P20807 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CAPN3P20807 PCDHA3-202ENST00000532566 4594 ntBASIC14.84□□□□□ -0.03
CAPN3P20807 UXT-AS1-201ENST00000590504 1525 ntBASIC14.84□□□□□ -0.03
CAPN3P20807 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.84□□□□□ -0.03
CAPN3P20807 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 AC107890.1-201ENST00000422478 521 ntBASIC14.84□□□□□ -0.03
CAPN3P20807 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.84□□□□□ -0.03
CAPN3P20807 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.84□□□□□ -0.03
CAPN3P20807 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.84□□□□□ -0.03
CAPN3P20807 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.84□□□□□ -0.03
CAPN3P20807 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CAPN3P20807 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.84□□□□□ -0.03
CAPN3P20807 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.84□□□□□ -0.03
CAPN3P20807 AC018529.2-202ENST00000611482 3087 ntBASIC14.84□□□□□ -0.03
CAPN3P20807 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.84□□□□□ -0.03
CAPN3P20807 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.84□□□□□ -0.03
CAPN3P20807 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.84□□□□□ -0.03
CAPN3P20807 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN3P20807 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
CAPN3P20807 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.84□□□□□ -0.03
CAPN3P20807 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.84□□□□□ -0.03
CAPN3P20807 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.84□□□□□ -0.03
CAPN3P20807 C8orf49-201ENST00000525043 1968 ntBASIC14.84□□□□□ -0.03
CAPN3P20807 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CAPN3P20807 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CAPN3P20807 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CAPN3P20807 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CAPN3P20807 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CAPN3P20807 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CAPN3P20807 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CAPN3P20807 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.83□□□□□ -0.03
CAPN3P20807 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CAPN3P20807 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
CAPN3P20807 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CAPN3P20807 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.83□□□□□ -0.04
CAPN3P20807 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms