Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.55□□□□□ -0.24
UBCP0CG48 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
UBCP0CG48 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
UBCP0CG48 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
UBCP0CG48 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.55□□□□□ -0.24
UBCP0CG48 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
UBCP0CG48 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.54□□□□□ -0.24
UBCP0CG48 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
UBCP0CG48 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
UBCP0CG48 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.54□□□□□ -0.24
UBCP0CG48 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
UBCP0CG48 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.54□□□□□ -0.24
UBCP0CG48 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.54□□□□□ -0.24
UBCP0CG48 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.54□□□□□ -0.24
UBCP0CG48 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.54□□□□□ -0.24
UBCP0CG48 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
UBCP0CG48 AL133267.1-201ENST00000398220 340 ntBASIC13.54□□□□□ -0.24
UBCP0CG48 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.54□□□□□ -0.24
UBCP0CG48 FAM58DP-201ENST00000428076 619 ntBASIC13.54□□□□□ -0.24
UBCP0CG48 RBPMS2P1-201ENST00000437762 623 ntBASIC13.54□□□□□ -0.24
UBCP0CG48 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.54□□□□□ -0.24
UBCP0CG48 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
UBCP0CG48 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 SERBP1P3-201ENST00000459980 809 ntBASIC13.54□□□□□ -0.24
UBCP0CG48 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.54□□□□□ -0.24
UBCP0CG48 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.54□□□□□ -0.24
UBCP0CG48 POLD2P1-201ENST00000511220 997 ntBASIC13.54□□□□□ -0.24
UBCP0CG48 AP000344.2-201ENST00000512987 629 ntBASIC13.54□□□□□ -0.24
UBCP0CG48 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.54□□□□□ -0.24
UBCP0CG48 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
UBCP0CG48 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.54□□□□□ -0.24
UBCP0CG48 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.54□□□□□ -0.24
UBCP0CG48 MIR6069-201ENST00000620069 79 ntBASIC13.54□□□□□ -0.24
UBCP0CG48 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.54□□□□□ -0.24
UBCP0CG48 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.54□□□□□ -0.24
UBCP0CG48 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
UBCP0CG48 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.54□□□□□ -0.24
UBCP0CG48 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
UBCP0CG48 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
UBCP0CG48 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
UBCP0CG48 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBCP0CG48 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.53□□□□□ -0.24
UBCP0CG48 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.53□□□□□ -0.24
UBCP0CG48 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.53□□□□□ -0.24
UBCP0CG48 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.53□□□□□ -0.24
UBCP0CG48 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
UBCP0CG48 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 MIR574-201ENST00000385209 96 ntBASIC13.53□□□□□ -0.24
UBCP0CG48 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.53□□□□□ -0.24
UBCP0CG48 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.53□□□□□ -0.24
UBCP0CG48 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.53□□□□□ -0.24
UBCP0CG48 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
UBCP0CG48 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.53□□□□□ -0.24
UBCP0CG48 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.53□□□□□ -0.24
UBCP0CG48 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.53□□□□□ -0.24
UBCP0CG48 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.53□□□□□ -0.24
UBCP0CG48 AL645728.2-202ENST00000641679 227 ntBASIC13.53□□□□□ -0.24
UBCP0CG48 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
UBCP0CG48 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms