Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
ATP1A1P05023 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.4■□□□□ 0.22
ATP1A1P05023 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP1A1P05023 AC005237.2-201ENST00000434368 219 ntBASIC16.4■□□□□ 0.22
ATP1A1P05023 SPCS2P4-201ENST00000436160 681 ntBASIC16.4■□□□□ 0.22
ATP1A1P05023 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP1A1P05023 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP1A1P05023 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP1A1P05023 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.4■□□□□ 0.22
ATP1A1P05023 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.4■□□□□ 0.22
ATP1A1P05023 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.4■□□□□ 0.22
ATP1A1P05023 AC093520.2-201ENST00000561830 333 ntBASIC16.4■□□□□ 0.22
ATP1A1P05023 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.4■□□□□ 0.22
ATP1A1P05023 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.4■□□□□ 0.22
ATP1A1P05023 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
ATP1A1P05023 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ATP1A1P05023 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ATP1A1P05023 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ATP1A1P05023 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ATP1A1P05023 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
ATP1A1P05023 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ATP1A1P05023 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP1A1P05023 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1A1P05023 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
ATP1A1P05023 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ATP1A1P05023 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1A1P05023 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1A1P05023 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
ATP1A1P05023 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1A1P05023 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1A1P05023 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.39■□□□□ 0.21
ATP1A1P05023 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.39■□□□□ 0.21
ATP1A1P05023 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.39■□□□□ 0.21
ATP1A1P05023 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1A1P05023 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.39■□□□□ 0.21
ATP1A1P05023 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP1A1P05023 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1A1P05023 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
ATP1A1P05023 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP1A1P05023 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1A1P05023 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
ATP1A1P05023 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP1A1P05023 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1A1P05023 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1A1P05023 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1A1P05023 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
ATP1A1P05023 BEND3P1-201ENST00000421591 1944 ntBASIC16.39■□□□□ 0.21
ATP1A1P05023 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.39■□□□□ 0.21
ATP1A1P05023 REXO1L4P-201ENST00000605109 1937 ntBASIC16.39■□□□□ 0.21
ATP1A1P05023 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1A1P05023 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.38■□□□□ 0.21
ATP1A1P05023 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP1A1P05023 AP3S2-216ENST00000617003 1561 ntBASIC16.38■□□□□ 0.21
ATP1A1P05023 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1A1P05023 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP1A1P05023 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1A1P05023 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP1A1P05023 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1A1P05023 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1A1P05023 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1A1P05023 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP1A1P05023 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1A1P05023 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1A1P05023 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1A1P05023 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP1A1P05023 AL627223.1-201ENST00000416693 442 ntBASIC16.38■□□□□ 0.21
ATP1A1P05023 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP1A1P05023 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.38■□□□□ 0.21
ATP1A1P05023 AC069335.1-201ENST00000489972 472 ntBASIC16.38■□□□□ 0.21
ATP1A1P05023 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.38■□□□□ 0.21
ATP1A1P05023 IGHV3-62-201ENST00000520057 340 ntBASIC16.38■□□□□ 0.21
ATP1A1P05023 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1A1P05023 LINC01225-203ENST00000563550 1244 ntBASIC16.38■□□□□ 0.21
ATP1A1P05023 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.38■□□□□ 0.21
ATP1A1P05023 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.38■□□□□ 0.21
ATP1A1P05023 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.38■□□□□ 0.21
ATP1A1P05023 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.38■□□□□ 0.21
ATP1A1P05023 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1A1P05023 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1A1P05023 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms