Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC11.74□□□□□ -0.53
TCRAP04437 INO80E-210ENST00000567705 880 ntTSL 3 BASIC11.74□□□□□ -0.53
TCRAP04437 AP001005.1-201ENST00000571755 1248 ntBASIC11.74□□□□□ -0.53
TCRAP04437 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRAP04437 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TCRAP04437 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TCRAP04437 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.74□□□□□ -0.53
TCRAP04437 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TCRAP04437 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
TCRAP04437 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
TCRAP04437 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TCRAP04437 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC11.74□□□□□ -0.53
TCRAP04437 AC010327.5-201ENST00000586923 3061 ntBASIC11.74□□□□□ -0.53
TCRAP04437 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRAP04437 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRAP04437 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRAP04437 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11.74□□□□□ -0.53
TCRAP04437 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRAP04437 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRAP04437 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRAP04437 AC092135.3-201ENST00000624151 1846 ntBASIC11.74□□□□□ -0.53
TCRAP04437 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TCRAP04437 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.74□□□□□ -0.53
TCRAP04437 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
TCRAP04437 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRAP04437 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
TCRAP04437 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRAP04437 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.74□□□□□ -0.53
TCRAP04437 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRAP04437 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
TCRAP04437 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
TCRAP04437 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.73□□□□□ -0.53
TCRAP04437 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC11.73□□□□□ -0.53
TCRAP04437 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 MIR346-201ENST00000362234 95 ntBASIC11.73□□□□□ -0.53
TCRAP04437 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.73□□□□□ -0.53
TCRAP04437 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.73□□□□□ -0.53
TCRAP04437 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
TCRAP04437 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.73□□□□□ -0.53
TCRAP04437 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC11.73□□□□□ -0.53
TCRAP04437 KRT18P2-201ENST00000447938 1258 ntBASIC11.73□□□□□ -0.53
TCRAP04437 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.73□□□□□ -0.53
TCRAP04437 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC11.73□□□□□ -0.53
TCRAP04437 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.73□□□□□ -0.53
TCRAP04437 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
TCRAP04437 FAM86C2P-203ENST00000528684 1004 ntBASIC11.73□□□□□ -0.53
TCRAP04437 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.73□□□□□ -0.53
TCRAP04437 AP000842.3-202ENST00000569238 1080 ntBASIC11.73□□□□□ -0.53
TCRAP04437 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
TCRAP04437 ADAMTS7P1-201ENST00000613213 4793 ntBASIC11.73□□□□□ -0.53
TCRAP04437 AL691432.3-201ENST00000621860 400 ntBASIC11.73□□□□□ -0.53
TCRAP04437 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.73□□□□□ -0.53
TCRAP04437 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
TCRAP04437 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
TCRAP04437 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRAP04437 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.73□□□□□ -0.53
TCRAP04437 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRAP04437 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.72□□□□□ -0.53
TCRAP04437 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
TCRAP04437 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
TCRAP04437 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
TCRAP04437 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.72□□□□□ -0.53
TCRAP04437 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRAP04437 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC11.72□□□□□ -0.53
TCRAP04437 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.72□□□□□ -0.53
TCRAP04437 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRAP04437 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms