Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOA1P02647 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOA1P02647 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
APOA1P02647 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA1P02647 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.78□□□□□ -0.2
APOA1P02647 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
APOA1P02647 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA1P02647 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA1P02647 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA1P02647 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA1P02647 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
APOA1P02647 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.78□□□□□ -0.2
APOA1P02647 RCN1P1-201ENST00000400413 996 ntBASIC13.78□□□□□ -0.2
APOA1P02647 PMS2P4-201ENST00000412466 1052 ntBASIC13.78□□□□□ -0.2
APOA1P02647 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.78□□□□□ -0.2
APOA1P02647 NUS1P2-201ENST00000417358 873 ntBASIC13.78□□□□□ -0.2
APOA1P02647 RBM17P3-201ENST00000417687 1192 ntBASIC13.78□□□□□ -0.2
APOA1P02647 AP002383.4-201ENST00000442518 975 ntBASIC13.78□□□□□ -0.2
APOA1P02647 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
APOA1P02647 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.78□□□□□ -0.2
APOA1P02647 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.78□□□□□ -0.2
APOA1P02647 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
APOA1P02647 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
APOA1P02647 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.78□□□□□ -0.2
APOA1P02647 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA1P02647 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA1P02647 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.78□□□□□ -0.2
APOA1P02647 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA1P02647 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.78□□□□□ -0.2
APOA1P02647 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.78□□□□□ -0.2
APOA1P02647 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA1P02647 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.78□□□□□ -0.2
APOA1P02647 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.78□□□□□ -0.2
APOA1P02647 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.78□□□□□ -0.2
APOA1P02647 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA1P02647 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOA1P02647 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA1P02647 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.78□□□□□ -0.2
APOA1P02647 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA1P02647 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA1P02647 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.78□□□□□ -0.2
APOA1P02647 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.78□□□□□ -0.2
APOA1P02647 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA1P02647 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
APOA1P02647 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA1P02647 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
APOA1P02647 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
APOA1P02647 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
APOA1P02647 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
APOA1P02647 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
APOA1P02647 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
APOA1P02647 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.77□□□□□ -0.2
APOA1P02647 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
APOA1P02647 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.77□□□□□ -0.2
APOA1P02647 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
APOA1P02647 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
APOA1P02647 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
APOA1P02647 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.2
APOA1P02647 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
APOA1P02647 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA1P02647 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA1P02647 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA1P02647 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOA1P02647 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA1P02647 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA1P02647 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA1P02647 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
APOA1P02647 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.77□□□□□ -0.21
APOA1P02647 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA1P02647 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
APOA1P02647 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.77□□□□□ -0.21
APOA1P02647 AC132008.2-207ENST00000454517 770 ntBASIC13.77□□□□□ -0.21
APOA1P02647 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.77□□□□□ -0.21
APOA1P02647 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
APOA1P02647 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOA1P02647 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.77□□□□□ -0.21
APOA1P02647 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.77□□□□□ -0.21
APOA1P02647 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOA1P02647 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOA1P02647 WASH3P-207ENST00000560956 1394 ntBASIC13.77□□□□□ -0.21
APOA1P02647 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.77□□□□□ -0.21
APOA1P02647 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOA1P02647 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.77□□□□□ -0.21
APOA1P02647 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.77□□□□□ -0.21
APOA1P02647 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.77□□□□□ -0.21
APOA1P02647 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
APOA1P02647 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA1P02647 FO538757.1-201ENST00000623083 1397 ntBASIC13.77□□□□□ -0.21
APOA1P02647 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
APOA1P02647 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
APOA1P02647 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
APOA1P02647 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA1P02647 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA1P02647 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA1P02647 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA1P02647 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
APOA1P02647 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.76□□□□□ -0.21
APOA1P02647 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOA1P02647 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOA1P02647 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms