Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
IFNA1P01562 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
IFNA1P01562 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
IFNA1P01562 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
IFNA1P01562 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.21□□□□□ -0.45
IFNA1P01562 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
IFNA1P01562 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
IFNA1P01562 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.21□□□□□ -0.45
IFNA1P01562 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
IFNA1P01562 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
IFNA1P01562 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
IFNA1P01562 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
IFNA1P01562 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
IFNA1P01562 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
IFNA1P01562 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.21□□□□□ -0.45
IFNA1P01562 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
IFNA1P01562 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.21□□□□□ -0.45
IFNA1P01562 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.21□□□□□ -0.45
IFNA1P01562 KRT18P1-202ENST00000452408 1331 ntBASIC12.21□□□□□ -0.45
IFNA1P01562 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
IFNA1P01562 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
IFNA1P01562 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.21□□□□□ -0.45
IFNA1P01562 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.21□□□□□ -0.45
IFNA1P01562 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.21□□□□□ -0.45
IFNA1P01562 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
IFNA1P01562 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
IFNA1P01562 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
IFNA1P01562 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
IFNA1P01562 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
IFNA1P01562 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
IFNA1P01562 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
IFNA1P01562 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
IFNA1P01562 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.21□□□□□ -0.45
IFNA1P01562 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.21□□□□□ -0.45
IFNA1P01562 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.21□□□□□ -0.45
IFNA1P01562 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.21□□□□□ -0.45
IFNA1P01562 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.21□□□□□ -0.45
IFNA1P01562 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.21□□□□□ -0.45
IFNA1P01562 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.21□□□□□ -0.45
IFNA1P01562 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.21□□□□□ -0.45
IFNA1P01562 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.21□□□□□ -0.45
IFNA1P01562 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.21□□□□□ -0.45
IFNA1P01562 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
IFNA1P01562 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
IFNA1P01562 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
IFNA1P01562 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
IFNA1P01562 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
IFNA1P01562 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
IFNA1P01562 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
IFNA1P01562 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
IFNA1P01562 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
IFNA1P01562 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
IFNA1P01562 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.21□□□□□ -0.46
IFNA1P01562 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.21□□□□□ -0.46
IFNA1P01562 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
IFNA1P01562 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
IFNA1P01562 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
IFNA1P01562 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
IFNA1P01562 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.2□□□□□ -0.46
IFNA1P01562 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
IFNA1P01562 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.2□□□□□ -0.46
IFNA1P01562 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.2□□□□□ -0.46
IFNA1P01562 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
IFNA1P01562 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.2□□□□□ -0.46
IFNA1P01562 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 PMS2P7-201ENST00000506558 1336 ntBASIC12.2□□□□□ -0.46
IFNA1P01562 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.2□□□□□ -0.46
IFNA1P01562 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
IFNA1P01562 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
IFNA1P01562 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
IFNA1P01562 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.2□□□□□ -0.46
IFNA1P01562 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
IFNA1P01562 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.2□□□□□ -0.46
IFNA1P01562 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.2□□□□□ -0.46
IFNA1P01562 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
IFNA1P01562 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.2□□□□□ -0.46
IFNA1P01562 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.2□□□□□ -0.46
IFNA1P01562 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.2□□□□□ -0.46
IFNA1P01562 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
IFNA1P01562 MIR4515-201ENST00000584082 81 ntBASIC12.2□□□□□ -0.46
IFNA1P01562 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
IFNA1P01562 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms