Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.05■□□□□ 0.16
BEST1O76090 AP000812.2-201ENST00000538934 718 ntBASIC16.05■□□□□ 0.16
BEST1O76090 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
BEST1O76090 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.05■□□□□ 0.16
BEST1O76090 DUX4L47-201ENST00000566374 394 ntBASIC16.05■□□□□ 0.16
BEST1O76090 AC004466.1-201ENST00000599515 1080 ntBASIC16.05■□□□□ 0.16
BEST1O76090 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.05■□□□□ 0.16
BEST1O76090 MIR6805-201ENST00000615055 62 ntBASIC16.05■□□□□ 0.16
BEST1O76090 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.05■□□□□ 0.16
BEST1O76090 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.05■□□□□ 0.16
BEST1O76090 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.05■□□□□ 0.16
BEST1O76090 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
BEST1O76090 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.05■□□□□ 0.16
BEST1O76090 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
BEST1O76090 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
BEST1O76090 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.04■□□□□ 0.16
BEST1O76090 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.04■□□□□ 0.16
BEST1O76090 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.04■□□□□ 0.16
BEST1O76090 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST1O76090 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST1O76090 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.04■□□□□ 0.16
BEST1O76090 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
BEST1O76090 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST1O76090 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.04■□□□□ 0.16
BEST1O76090 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.04■□□□□ 0.16
BEST1O76090 AC078819.1-201ENST00000547454 765 ntBASIC16.04■□□□□ 0.16
BEST1O76090 AC012085.1-201ENST00000548270 765 ntBASIC16.04■□□□□ 0.16
BEST1O76090 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST1O76090 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.04■□□□□ 0.16
BEST1O76090 COX11-210ENST00000639671 696 ntBASIC16.04■□□□□ 0.16
BEST1O76090 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.04■□□□□ 0.16
BEST1O76090 AC055811.4-201ENST00000624039 1754 ntBASIC16.04■□□□□ 0.16
BEST1O76090 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
BEST1O76090 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 AC011270.2-201ENST00000624293 2550 ntBASIC16.04■□□□□ 0.16
BEST1O76090 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST1O76090 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST1O76090 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.03■□□□□ 0.16
BEST1O76090 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
BEST1O76090 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
BEST1O76090 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.03■□□□□ 0.16
BEST1O76090 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 AC104640.1-201ENST00000562617 2109 ntBASIC16.03■□□□□ 0.16
BEST1O76090 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.03■□□□□ 0.16
BEST1O76090 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.03■□□□□ 0.16
BEST1O76090 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.03■□□□□ 0.16
BEST1O76090 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.03■□□□□ 0.16
BEST1O76090 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BEST1O76090 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.03■□□□□ 0.16
BEST1O76090 AC026954.1-201ENST00000429771 1293 ntBASIC16.03■□□□□ 0.16
BEST1O76090 C2orf27AP3-201ENST00000434123 579 ntBASIC16.03■□□□□ 0.16
BEST1O76090 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.03■□□□□ 0.16
BEST1O76090 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
BEST1O76090 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.03■□□□□ 0.16
BEST1O76090 AC022616.1-201ENST00000518688 554 ntBASIC16.03■□□□□ 0.16
BEST1O76090 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.03■□□□□ 0.16
BEST1O76090 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.03■□□□□ 0.16
BEST1O76090 AL359881.2-201ENST00000602973 570 ntBASIC16.03■□□□□ 0.16
BEST1O76090 AL354718.3-201ENST00000616414 581 ntBASIC16.03■□□□□ 0.16
BEST1O76090 AC132938.4-201ENST00000623835 848 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms