Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTNSO60931 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.39□□□□□ -0.11
CTNSO60931 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.39□□□□□ -0.11
CTNSO60931 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CTNSO60931 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.39□□□□□ -0.11
CTNSO60931 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.39□□□□□ -0.11
CTNSO60931 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.39□□□□□ -0.11
CTNSO60931 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.39□□□□□ -0.11
CTNSO60931 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.39□□□□□ -0.11
CTNSO60931 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTNSO60931 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTNSO60931 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CTNSO60931 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTNSO60931 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTNSO60931 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.39□□□□□ -0.11
CTNSO60931 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CTNSO60931 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.39□□□□□ -0.11
CTNSO60931 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTNSO60931 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTNSO60931 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.39□□□□□ -0.11
CTNSO60931 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.39□□□□□ -0.11
CTNSO60931 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTNSO60931 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTNSO60931 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTNSO60931 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTNSO60931 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CTNSO60931 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTNSO60931 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CTNSO60931 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.38□□□□□ -0.11
CTNSO60931 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.38□□□□□ -0.11
CTNSO60931 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.38□□□□□ -0.11
CTNSO60931 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CTNSO60931 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.38□□□□□ -0.11
CTNSO60931 AC132938.2-201ENST00000579188 680 ntBASIC14.38□□□□□ -0.11
CTNSO60931 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.38□□□□□ -0.11
CTNSO60931 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.38□□□□□ -0.11
CTNSO60931 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.38□□□□□ -0.11
CTNSO60931 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.38□□□□□ -0.11
CTNSO60931 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.38□□□□□ -0.11
CTNSO60931 AL591163.1-201ENST00000641757 987 ntBASIC14.38□□□□□ -0.11
CTNSO60931 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.38□□□□□ -0.11
CTNSO60931 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 REXO1L4P-201ENST00000605109 1937 ntBASIC14.38□□□□□ -0.11
CTNSO60931 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.38□□□□□ -0.11
CTNSO60931 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CTNSO60931 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.38□□□□□ -0.11
CTNSO60931 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CTNSO60931 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CTNSO60931 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 AL360270.3-201ENST00000609118 1348 ntBASIC14.38□□□□□ -0.11
CTNSO60931 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CTNSO60931 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTNSO60931 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTNSO60931 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.37□□□□□ -0.11
CTNSO60931 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTNSO60931 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTNSO60931 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTNSO60931 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTNSO60931 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTNSO60931 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTNSO60931 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTNSO60931 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTNSO60931 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTNSO60931 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTNSO60931 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTNSO60931 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTNSO60931 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.37□□□□□ -0.11
CTNSO60931 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.37□□□□□ -0.11
CTNSO60931 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.37□□□□□ -0.11
CTNSO60931 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTNSO60931 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CTNSO60931 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTNSO60931 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms