Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IDH3BO43837 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.23□□□□□ -0.13
IDH3BO43837 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.23□□□□□ -0.13
IDH3BO43837 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
IDH3BO43837 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
IDH3BO43837 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.22□□□□□ -0.13
IDH3BO43837 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.22□□□□□ -0.13
IDH3BO43837 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
IDH3BO43837 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.22□□□□□ -0.13
IDH3BO43837 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.22□□□□□ -0.13
IDH3BO43837 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.22□□□□□ -0.13
IDH3BO43837 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.22□□□□□ -0.13
IDH3BO43837 SLC25A1P1-201ENST00000528351 927 ntBASIC14.22□□□□□ -0.13
IDH3BO43837 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.22□□□□□ -0.13
IDH3BO43837 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.22□□□□□ -0.13
IDH3BO43837 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.22□□□□□ -0.13
IDH3BO43837 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.22□□□□□ -0.13
IDH3BO43837 AC120114.3-201ENST00000611923 658 ntBASIC14.22□□□□□ -0.13
IDH3BO43837 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.22□□□□□ -0.13
IDH3BO43837 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 AC013726.1-201ENST00000563747 2285 ntBASIC14.22□□□□□ -0.13
IDH3BO43837 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.22□□□□□ -0.13
IDH3BO43837 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
IDH3BO43837 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
IDH3BO43837 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.22□□□□□ -0.13
IDH3BO43837 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IDH3BO43837 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.21□□□□□ -0.13
IDH3BO43837 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
IDH3BO43837 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
IDH3BO43837 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
IDH3BO43837 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
IDH3BO43837 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
IDH3BO43837 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.21□□□□□ -0.13
IDH3BO43837 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.21□□□□□ -0.13
IDH3BO43837 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
IDH3BO43837 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.21□□□□□ -0.13
IDH3BO43837 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.21□□□□□ -0.13
IDH3BO43837 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
IDH3BO43837 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
IDH3BO43837 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
IDH3BO43837 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.21□□□□□ -0.13
IDH3BO43837 MKNK2P1-201ENST00000437526 628 ntBASIC14.21□□□□□ -0.13
IDH3BO43837 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.21□□□□□ -0.13
IDH3BO43837 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.21□□□□□ -0.13
IDH3BO43837 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
IDH3BO43837 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.21□□□□□ -0.13
IDH3BO43837 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.21□□□□□ -0.13
IDH3BO43837 KRT8P48-201ENST00000515599 1220 ntBASIC14.21□□□□□ -0.13
IDH3BO43837 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.21□□□□□ -0.13
IDH3BO43837 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.21□□□□□ -0.13
IDH3BO43837 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 AC055717.3-201ENST00000622967 595 ntBASIC14.21□□□□□ -0.13
IDH3BO43837 C20orf181-201ENST00000623918 480 ntBASIC14.21□□□□□ -0.13
IDH3BO43837 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
IDH3BO43837 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.21□□□□□ -0.13
IDH3BO43837 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.21□□□□□ -0.13
IDH3BO43837 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.21□□□□□ -0.13
IDH3BO43837 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
IDH3BO43837 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
IDH3BO43837 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
IDH3BO43837 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
IDH3BO43837 AP3S2-216ENST00000617003 1561 ntBASIC14.21□□□□□ -0.14
IDH3BO43837 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.21□□□□□ -0.14
IDH3BO43837 DGCR9-201ENST00000609630 2415 ntBASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms