Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF13O43567 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RNF13O43567 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.06□□□□□ -0.16
RNF13O43567 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF13O43567 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF13O43567 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RNF13O43567 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF13O43567 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF13O43567 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.05□□□□□ -0.16
RNF13O43567 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
RNF13O43567 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.05□□□□□ -0.16
RNF13O43567 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.05□□□□□ -0.16
RNF13O43567 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF13O43567 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF13O43567 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.05□□□□□ -0.16
RNF13O43567 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF13O43567 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF13O43567 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF13O43567 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.05□□□□□ -0.16
RNF13O43567 AC140878.1-201ENST00000565277 250 ntBASIC14.05□□□□□ -0.16
RNF13O43567 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.05□□□□□ -0.16
RNF13O43567 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RNF13O43567 AC025048.3-201ENST00000590609 569 ntBASIC14.05□□□□□ -0.16
RNF13O43567 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF13O43567 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF13O43567 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.05□□□□□ -0.16
RNF13O43567 AC005702.4-201ENST00000618393 416 ntBASIC14.05□□□□□ -0.16
RNF13O43567 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF13O43567 AC093028.1-201ENST00000622998 982 ntBASIC14.05□□□□□ -0.16
RNF13O43567 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF13O43567 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RNF13O43567 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF13O43567 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
RNF13O43567 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RNF13O43567 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF13O43567 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 AC084364.1-201ENST00000551967 1556 ntBASIC14.05□□□□□ -0.16
RNF13O43567 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF13O43567 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF13O43567 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF13O43567 Z97205.2-201ENST00000564697 1639 ntBASIC14.04□□□□□ -0.16
RNF13O43567 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF13O43567 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.04□□□□□ -0.16
RNF13O43567 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
RNF13O43567 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RNF13O43567 RPL5P21-201ENST00000404620 815 ntBASIC14.04□□□□□ -0.16
RNF13O43567 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.04□□□□□ -0.16
RNF13O43567 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF13O43567 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.04□□□□□ -0.16
RNF13O43567 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.04□□□□□ -0.16
RNF13O43567 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RNF13O43567 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.04□□□□□ -0.16
RNF13O43567 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.04□□□□□ -0.16
RNF13O43567 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF13O43567 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF13O43567 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
RNF13O43567 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF13O43567 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RNF13O43567 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF13O43567 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
RNF13O43567 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RNF13O43567 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms