Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN1O15353 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN1O15353 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXN1O15353 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN1O15353 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
FOXN1O15353 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN1O15353 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXN1O15353 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXN1O15353 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN1O15353 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN1O15353 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN1O15353 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN1O15353 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN1O15353 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXN1O15353 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.28■□□□□ 0.52
FOXN1O15353 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.28■□□□□ 0.52
FOXN1O15353 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.28■□□□□ 0.52
FOXN1O15353 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC18.28■□□□□ 0.52
FOXN1O15353 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
FOXN1O15353 AC025181.2-201ENST00000606994 802 ntBASIC18.28■□□□□ 0.52
FOXN1O15353 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.28■□□□□ 0.52
FOXN1O15353 PLS3-210ENST00000626746 216 ntTSL 4 BASIC18.28■□□□□ 0.52
FOXN1O15353 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXN1O15353 AC006453.4-201ENST00000636949 1252 ntBASIC18.28■□□□□ 0.52
FOXN1O15353 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN1O15353 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN1O15353 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXN1O15353 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN1O15353 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXN1O15353 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXN1O15353 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXN1O15353 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN1O15353 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXN1O15353 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXN1O15353 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN1O15353 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXN1O15353 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXN1O15353 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXN1O15353 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN1O15353 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
FOXN1O15353 AC013268.4-201ENST00000637413 2228 ntBASIC18.27■□□□□ 0.52
FOXN1O15353 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.27■□□□□ 0.52
FOXN1O15353 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
FOXN1O15353 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.27■□□□□ 0.52
FOXN1O15353 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXN1O15353 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXN1O15353 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXN1O15353 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXN1O15353 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXN1O15353 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXN1O15353 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXN1O15353 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXN1O15353 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXN1O15353 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.27■□□□□ 0.52
FOXN1O15353 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXN1O15353 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
FOXN1O15353 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXN1O15353 AC074338.1-201ENST00000416825 156 ntBASIC18.27■□□□□ 0.52
FOXN1O15353 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC18.27■□□□□ 0.52
FOXN1O15353 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.27■□□□□ 0.52
FOXN1O15353 AC022217.1-201ENST00000521069 738 ntBASIC18.27■□□□□ 0.52
FOXN1O15353 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXN1O15353 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.27■□□□□ 0.52
FOXN1O15353 AC087045.2-201ENST00000606279 1003 ntBASIC18.27■□□□□ 0.52
FOXN1O15353 AL645939.5-201ENST00000606834 243 ntBASIC18.27■□□□□ 0.52
FOXN1O15353 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXN1O15353 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.27■□□□□ 0.52
FOXN1O15353 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXN1O15353 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXN1O15353 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
FOXN1O15353 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.27■□□□□ 0.51
FOXN1O15353 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXN1O15353 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
FOXN1O15353 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXN1O15353 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXN1O15353 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
FOXN1O15353 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.27■□□□□ 0.51
FOXN1O15353 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXN1O15353 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
FOXN1O15353 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXN1O15353 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.27■□□□□ 0.51
FOXN1O15353 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.27■□□□□ 0.51
FOXN1O15353 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.27■□□□□ 0.51
FOXN1O15353 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
FOXN1O15353 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXN1O15353 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
FOXN1O15353 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.26■□□□□ 0.51
FOXN1O15353 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms