Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
NDUFA1O15239 ZNF259P1-201ENST00000407656 1365 ntBASIC10.57□□□□□ -0.72
NDUFA1O15239 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC10.57□□□□□ -0.72
NDUFA1O15239 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC10.57□□□□□ -0.72
NDUFA1O15239 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
NDUFA1O15239 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC10.57□□□□□ -0.72
NDUFA1O15239 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
NDUFA1O15239 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 PP14571-201ENST00000404327 934 ntTSL 2 BASIC10.57□□□□□ -0.72
NDUFA1O15239 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC10.57□□□□□ -0.72
NDUFA1O15239 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC10.57□□□□□ -0.72
NDUFA1O15239 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC10.57□□□□□ -0.72
NDUFA1O15239 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC10.57□□□□□ -0.72
NDUFA1O15239 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC10.57□□□□□ -0.72
NDUFA1O15239 RNA5SP419-201ENST00000515908 135 ntBASIC10.57□□□□□ -0.72
NDUFA1O15239 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC10.57□□□□□ -0.72
NDUFA1O15239 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC10.57□□□□□ -0.72
NDUFA1O15239 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC10.57□□□□□ -0.72
NDUFA1O15239 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 SPTSSB-204ENST00000617024 1292 ntBASIC10.57□□□□□ -0.72
NDUFA1O15239 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC10.57□□□□□ -0.72
NDUFA1O15239 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC10.57□□□□□ -0.72
NDUFA1O15239 REXO1L2P-201ENST00000425429 2069 ntBASIC10.57□□□□□ -0.72
NDUFA1O15239 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC10.57□□□□□ -0.72
NDUFA1O15239 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
NDUFA1O15239 AL691432.1-201ENST00000596308 1422 ntBASIC10.57□□□□□ -0.72
NDUFA1O15239 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
NDUFA1O15239 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
NDUFA1O15239 TNN-203ENST00000622870 3719 ntTSL 5 BASIC10.57□□□□□ -0.72
NDUFA1O15239 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
NDUFA1O15239 HLA-A-201ENST00000376802 1334 ntBASIC10.57□□□□□ -0.72
NDUFA1O15239 AKAP8P1-201ENST00000434743 1349 ntBASIC10.57□□□□□ -0.72
NDUFA1O15239 PTENP1-202ENST00000532280 3996 ntBASIC10.57□□□□□ -0.72
NDUFA1O15239 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
NDUFA1O15239 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
NDUFA1O15239 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
NDUFA1O15239 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
NDUFA1O15239 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
NDUFA1O15239 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
NDUFA1O15239 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
NDUFA1O15239 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC10.56□□□□□ -0.72
NDUFA1O15239 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
NDUFA1O15239 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC10.56□□□□□ -0.72
NDUFA1O15239 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
NDUFA1O15239 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC10.56□□□□□ -0.72
NDUFA1O15239 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
NDUFA1O15239 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC10.56□□□□□ -0.72
NDUFA1O15239 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
NDUFA1O15239 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
NDUFA1O15239 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC10.56□□□□□ -0.72
NDUFA1O15239 HNRNPA1P28-201ENST00000424481 961 ntBASIC10.56□□□□□ -0.72
NDUFA1O15239 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 AL591424.1-201ENST00000442569 1213 ntBASIC10.56□□□□□ -0.72
NDUFA1O15239 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC10.56□□□□□ -0.72
NDUFA1O15239 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC10.56□□□□□ -0.72
NDUFA1O15239 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC10.56□□□□□ -0.72
NDUFA1O15239 RN7SL589P-201ENST00000481268 310 ntBASIC10.56□□□□□ -0.72
NDUFA1O15239 RNA5SP410-201ENST00000516285 106 ntBASIC10.56□□□□□ -0.72
NDUFA1O15239 FAM86C2P-203ENST00000528684 1004 ntBASIC10.56□□□□□ -0.72
NDUFA1O15239 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC10.56□□□□□ -0.72
NDUFA1O15239 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC10.56□□□□□ -0.72
NDUFA1O15239 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC10.56□□□□□ -0.72
NDUFA1O15239 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC10.56□□□□□ -0.72
NDUFA1O15239 AC034105.1-201ENST00000563488 319 ntBASIC10.56□□□□□ -0.72
NDUFA1O15239 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC10.56□□□□□ -0.72
NDUFA1O15239 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC10.56□□□□□ -0.72
NDUFA1O15239 AC073389.1-201ENST00000595595 795 ntBASIC10.56□□□□□ -0.72
NDUFA1O15239 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms