Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PDLIM1O00151 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 AC089987.1-201ENST00000551654 2209 ntBASIC14.73□□□□□ -0.05
PDLIM1O00151 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.73□□□□□ -0.05
PDLIM1O00151 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
PDLIM1O00151 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.73□□□□□ -0.05
PDLIM1O00151 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
PDLIM1O00151 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.73□□□□□ -0.05
PDLIM1O00151 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.73□□□□□ -0.05
PDLIM1O00151 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.73□□□□□ -0.05
PDLIM1O00151 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.73□□□□□ -0.05
PDLIM1O00151 FAM58CP-201ENST00000435741 640 ntBASIC14.73□□□□□ -0.05
PDLIM1O00151 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.73□□□□□ -0.05
PDLIM1O00151 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.73□□□□□ -0.05
PDLIM1O00151 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.73□□□□□ -0.05
PDLIM1O00151 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.73□□□□□ -0.05
PDLIM1O00151 AL009183.1-201ENST00000603760 355 ntBASIC14.73□□□□□ -0.05
PDLIM1O00151 AL078644.1-201ENST00000609881 752 ntBASIC14.73□□□□□ -0.05
PDLIM1O00151 AC006538.3-201ENST00000612495 578 ntBASIC14.73□□□□□ -0.05
PDLIM1O00151 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.73□□□□□ -0.05
PDLIM1O00151 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.73□□□□□ -0.05
PDLIM1O00151 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PDLIM1O00151 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.73□□□□□ -0.05
PDLIM1O00151 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.73□□□□□ -0.05
PDLIM1O00151 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.73□□□□□ -0.05
PDLIM1O00151 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.73□□□□□ -0.05
PDLIM1O00151 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
PDLIM1O00151 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.73□□□□□ -0.05
PDLIM1O00151 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PDLIM1O00151 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.72□□□□□ -0.05
PDLIM1O00151 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.72□□□□□ -0.05
PDLIM1O00151 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PDLIM1O00151 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PDLIM1O00151 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.72□□□□□ -0.05
PDLIM1O00151 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
PDLIM1O00151 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.72□□□□□ -0.05
PDLIM1O00151 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PDLIM1O00151 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PDLIM1O00151 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PDLIM1O00151 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 AC002056.1-201ENST00000395613 760 ntBASIC14.72□□□□□ -0.05
PDLIM1O00151 ACTG1P14-201ENST00000446382 1122 ntBASIC14.72□□□□□ -0.05
PDLIM1O00151 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.72□□□□□ -0.05
PDLIM1O00151 AC112191.1-201ENST00000523689 701 ntBASIC14.72□□□□□ -0.05
PDLIM1O00151 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.72□□□□□ -0.05
PDLIM1O00151 AC099522.2-201ENST00000607001 744 ntBASIC14.72□□□□□ -0.05
PDLIM1O00151 AC055717.3-201ENST00000622967 595 ntBASIC14.72□□□□□ -0.05
PDLIM1O00151 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.72□□□□□ -0.05
PDLIM1O00151 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PDLIM1O00151 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
PDLIM1O00151 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM1O00151 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PDLIM1O00151 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.72□□□□□ -0.05
PDLIM1O00151 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM1O00151 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM1O00151 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.71□□□□□ -0.05
PDLIM1O00151 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.71□□□□□ -0.05
PDLIM1O00151 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM1O00151 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM1O00151 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM1O00151 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM1O00151 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM1O00151 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
PDLIM1O00151 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms