Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 AC243960.2-201ENST00000600996 747 ntBASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 ENPP7P14-201ENST00000621765 1040 ntBASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 AL365203.3-201ENST00000609742 2057 ntBASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 HOMER2P2-201ENST00000451621 847 ntBASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3FA6NER0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 FAM86HP-204ENST00000513466 959 ntBASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 AC022616.1-201ENST00000518688 554 ntBASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 AL118558.3-201ENST00000607414 1079 ntBASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 AC244093.1-201ENST00000610837 814 ntBASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms