Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 AC005034.1-201ENST00000426657 489 ntBASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 KRT17P7-201ENST00000451704 1104 ntBASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 CR383656.12-201ENST00000549567 513 ntBASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 MSTO2P-201ENST00000314835 1709 ntBASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 REXO1L4P-201ENST00000605109 1937 ntBASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 AC023157.3-201ENST00000619086 2088 ntBASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 ACTG1P3-201ENST00000431775 1114 ntBASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 GAPDHP21-201ENST00000450301 1010 ntBASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 AC093433.1-201ENST00000458048 571 ntBASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 TDH-203ENST00000531764 1110 ntBASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 AP001063.1-201ENST00000568332 529 ntBASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 AL035252.4-201ENST00000624174 288 ntBASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 AP000845.1-201ENST00000581677 2131 ntBASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGC4Q9Y5F7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGC4Q9Y5F7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGC4Q9Y5F7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGC4Q9Y5F7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGC4Q9Y5F7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGC4Q9Y5F7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGC4Q9Y5F7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGC4Q9Y5F7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
PCDHGC4Q9Y5F7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGC4Q9Y5F7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGC4Q9Y5F7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGC4Q9Y5F7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGC4Q9Y5F7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGC4Q9Y5F7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGC4Q9Y5F7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms