Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 GHSR-202ENST00000427970 912 ntBASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 KRT43P-201ENST00000434019 910 ntBASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 AC025181.2-201ENST00000606994 802 ntBASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 MROH4P-201ENST00000431302 1578 ntBASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 ACTBP11-201ENST00000436287 1126 ntBASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 RN7SL219P-201ENST00000582872 296 ntBASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.37■□□□□ 0.05
PCDHB1Q9Y5F3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 WASH3P-207ENST00000560956 1394 ntBASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHB1Q9Y5F3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms