Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 AC105250.1-201ENST00000509378 2057 ntBASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 AC136759.1-202ENST00000530858 2194 ntBASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 AC004449.1-201ENST00000564240 433 ntBASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 U82695.1-201ENST00000635752 1889 ntBASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 AC027612.1-201ENST00000445234 2395 ntBASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
R3HCC1Q9Y3T6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 AC092127.1-201ENST00000567093 3455 ntBASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 AC069335.1-201ENST00000489972 472 ntBASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 AL138918.1-201ENST00000568306 659 ntBASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.72■□□□□ 0.43
R3HCC1Q9Y3T6 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms