Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 AC006504.5-208ENST00000588784 2401 ntBASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 BX640514.1-201ENST00000583223 1918 ntBASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 AC041040.2-201ENST00000622926 2899 ntBASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 RPS8P6-201ENST00000426177 609 ntBASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
KCNIP3Q9Y2W7 REXO1L2P-201ENST00000425429 2069 ntBASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 LINC01230-201ENST00000625222 3017 ntBASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 RHOQP3-201ENST00000437982 621 ntBASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 AL139010.1-201ENST00000454878 894 ntBASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 AF186996.4-201ENST00000467186 377 ntBASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 AC092053.3-201ENST00000641308 4975 ntBASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KCNIP3Q9Y2W7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms