Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 AP005117.1-201ENST00000584346 1413 ntBASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 AF186996.4-201ENST00000467186 377 ntBASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 AC073648.2-201ENST00000510116 352 ntBASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 MTDHP3-201ENST00000594186 672 ntBASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 AP001269.4-201ENST00000609611 512 ntBASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 AC020658.7-201ENST00000624274 2442 ntBASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRCH1Q9Y2L9 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 SIGLEC16-201ENST00000599858 1437 ntBASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 KRT18P67-201ENST00000432816 1264 ntBASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 FAM197Y8-203ENST00000450145 560 ntBASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 FGFR3P6-201ENST00000457012 610 ntBASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 AC009078.2-202ENST00000463353 338 ntBASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 AL139288.1-201ENST00000623748 933 ntBASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRCH1Q9Y2L9 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.68□□□□□ -0.06
LRCH1Q9Y2L9 BEND3P3-201ENST00000611030 2440 ntBASIC14.68□□□□□ -0.06
LRCH1Q9Y2L9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRCH1Q9Y2L9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.68□□□□□ -0.06
LRCH1Q9Y2L9 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LRCH1Q9Y2L9 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRCH1Q9Y2L9 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRCH1Q9Y2L9 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LRCH1Q9Y2L9 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms