Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 CICP4-201ENST00000447359 2812 ntBASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPH3AQ9Y2J0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 DGCR5-201ENST00000399539 862 ntBASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 KRT18P43-201ENST00000469825 1281 ntBASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 FAM86LP-201ENST00000478302 853 ntBASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 PCDHA3-202ENST00000532566 4594 ntBASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 AC105250.1-201ENST00000509378 2057 ntBASIC14.18□□□□□ -0.14
RPH3AQ9Y2J0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms