Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
NPIPA1Q9UND3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 AL607033.1-201ENST00000623900 1599 ntBASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 PDIA3P1-201ENST00000471856 1510 ntBASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 AC092127.1-201ENST00000567093 3455 ntBASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 AC136604.1-201ENST00000418535 575 ntBASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 KLF2P4-201ENST00000451959 1225 ntBASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 BNIP3P42-201ENST00000454982 569 ntBASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 CTBP2P5-201ENST00000454986 1264 ntBASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 ENPP7P5-201ENST00000541031 1031 ntBASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 PTP4A1P2-201ENST00000546033 454 ntBASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 BNIP3P29-201ENST00000598302 571 ntBASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 AC011447.5-201ENST00000616168 564 ntBASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA1Q9UND3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA1Q9UND3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA1Q9UND3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA1Q9UND3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.21□□□□□ -0.13
NPIPA1Q9UND3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA1Q9UND3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA1Q9UND3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.21□□□□□ -0.13
NPIPA1Q9UND3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA1Q9UND3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
NPIPA1Q9UND3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA1Q9UND3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA1Q9UND3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA1Q9UND3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA1Q9UND3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms