Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 MTHFR-217ENST00000641820 1569 ntBASIC15.92■□□□□ 0.14
HPS4Q9NQG7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 MIR326-201ENST00000362220 95 ntBASIC15.92■□□□□ 0.14
HPS4Q9NQG7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 MIR1247-201ENST00000408206 136 ntBASIC15.92■□□□□ 0.14
HPS4Q9NQG7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 C2orf69P2-201ENST00000562032 1123 ntBASIC15.92■□□□□ 0.14
HPS4Q9NQG7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 AC243960.2-201ENST00000600996 747 ntBASIC15.92■□□□□ 0.14
HPS4Q9NQG7 AC091271.1-201ENST00000611877 1162 ntBASIC15.92■□□□□ 0.14
HPS4Q9NQG7 BX539320.1-201ENST00000623759 877 ntBASIC15.92■□□□□ 0.14
HPS4Q9NQG7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HPS4Q9NQG7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 AC104640.1-201ENST00000562617 2109 ntBASIC15.91■□□□□ 0.14
HPS4Q9NQG7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 BCYRN1-201ENST00000418539 200 ntBASIC15.91■□□□□ 0.14
HPS4Q9NQG7 GOLGA2P4-201ENST00000441462 777 ntBASIC15.91■□□□□ 0.14
HPS4Q9NQG7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 AL590640.2-201ENST00000457038 527 ntBASIC15.91■□□□□ 0.14
HPS4Q9NQG7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 MIR3615-201ENST00000581999 87 ntBASIC15.91■□□□□ 0.14
HPS4Q9NQG7 AC103810.3-201ENST00000583567 96 ntBASIC15.91■□□□□ 0.14
HPS4Q9NQG7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS4Q9NQG7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 RNU1-114P-201ENST00000365297 166 ntBASIC15.9■□□□□ 0.14
HPS4Q9NQG7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms