Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 AC140912.1-201ENST00000577171 1054 ntBASIC13.5□□□□□ -0.25
CDH20Q9HBT6 MIR3197-201ENST00000582241 73 ntBASIC13.5□□□□□ -0.25
CDH20Q9HBT6 AC138761.1-201ENST00000584393 385 ntBASIC13.5□□□□□ -0.25
CDH20Q9HBT6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 AC027307.3-201ENST00000594262 1100 ntBASIC13.5□□□□□ -0.25
CDH20Q9HBT6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 AC000095.1-201ENST00000603208 874 ntBASIC13.5□□□□□ -0.25
CDH20Q9HBT6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 AC007431.3-201ENST00000623221 587 ntBASIC13.5□□□□□ -0.25
CDH20Q9HBT6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 AC138969.2-201ENST00000532739 9932 ntBASIC13.5□□□□□ -0.25
CDH20Q9HBT6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.5□□□□□ -0.25
CDH20Q9HBT6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.49□□□□□ -0.25
CDH20Q9HBT6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH20Q9HBT6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.48□□□□□ -0.25
CDH20Q9HBT6 AC009090.5-201ENST00000624886 2285 ntBASIC13.48□□□□□ -0.25
CDH20Q9HBT6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDH20Q9HBT6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.48□□□□□ -0.25
CDH20Q9HBT6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDH20Q9HBT6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDH20Q9HBT6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDH20Q9HBT6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CDH20Q9HBT6 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDH20Q9HBT6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDH20Q9HBT6 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
CDH20Q9HBT6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDH20Q9HBT6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDH20Q9HBT6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.48□□□□□ -0.25
CDH20Q9HBT6 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDH20Q9HBT6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDH20Q9HBT6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.48□□□□□ -0.25
CDH20Q9HBT6 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms