Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 AC093433.1-201ENST00000458048 571 ntBASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 AC004066.1-201ENST00000502488 802 ntBASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 REXO1L6P-201ENST00000603433 1515 ntBASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ATP6V0A4Q9HBG4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP6V0A4Q9HBG4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP6V0A4Q9HBG4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP6V0A4Q9HBG4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.33
ATP6V0A4Q9HBG4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP6V0A4Q9HBG4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP6V0A4Q9HBG4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATP6V0A4Q9HBG4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATP6V0A4Q9HBG4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATP6V0A4Q9HBG4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP6V0A4Q9HBG4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0A4Q9HBG4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 AC093525.8-201ENST00000624099 1342 ntBASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 ACKR1-201ENST00000368121 1240 ntBASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 BAATP1-201ENST00000412284 1225 ntBASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 AL355864.2-201ENST00000447420 863 ntBASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 AC022137.2-201ENST00000503482 481 ntBASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 SAMD11P1-201ENST00000571429 661 ntBASIC17.07■□□□□ 0.32
ATP6V0A4Q9HBG4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 327.8 ms