Protein–RNA interactions for Protein: Q9BZW5

TM6SF1, Transmembrane 6 superfamily member 1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1Q9BZW5 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 AC093004.1-201ENST00000508850 424 ntBASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM6SF1Q9BZW5 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 GNAQP1-201ENST00000444815 1067 ntBASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 GPALPP1-207ENST00000611650 899 ntBASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 AC113367.3-201ENST00000508316 1912 ntBASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.06■□□□□ 0.48
TM6SF1Q9BZW5 SLC7A15P-201ENST00000424028 1363 ntBASIC18.05■□□□□ 0.48
TM6SF1Q9BZW5 AL137783.1-201ENST00000623494 1896 ntBASIC18.05■□□□□ 0.48
TM6SF1Q9BZW5 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TM6SF1Q9BZW5 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.05■□□□□ 0.48
TM6SF1Q9BZW5 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM6SF1Q9BZW5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TM6SF1Q9BZW5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM6SF1Q9BZW5 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC18.05■□□□□ 0.48
TM6SF1Q9BZW5 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.05■□□□□ 0.48
TM6SF1Q9BZW5 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM6SF1Q9BZW5 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM6SF1Q9BZW5 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms