Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 MTDHP5-201ENST00000598980 586 ntBASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 RN7SL828P-201ENST00000607615 303 ntBASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 AC005840.4-201ENST00000541242 2494 ntBASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 MIR574-201ENST00000385209 96 ntBASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 SPDYE14P-201ENST00000442619 822 ntBASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HDHD3Q9BSH5 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HDHD3Q9BSH5 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HDHD3Q9BSH5 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HDHD3Q9BSH5 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.02□□□□□ -0.32
HDHD3Q9BSH5 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HDHD3Q9BSH5 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HDHD3Q9BSH5 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
HDHD3Q9BSH5 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HDHD3Q9BSH5 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HDHD3Q9BSH5 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HDHD3Q9BSH5 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
HDHD3Q9BSH5 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 AC004461.1-201ENST00000412461 403 ntBASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 AC011467.4-201ENST00000594891 528 ntBASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 AL513210.1-201ENST00000629608 234 ntBASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 KRT8P12-202ENST00000472924 1397 ntBASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HDHD3Q9BSH5 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms