Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PTPN18Q99952 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
PTPN18Q99952 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN18Q99952 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN18Q99952 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PTPN18Q99952 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN18Q99952 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN18Q99952 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
PTPN18Q99952 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN18Q99952 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 AC092127.1-201ENST00000567093 3455 ntBASIC17.29■□□□□ 0.36
PTPN18Q99952 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 NDUFS6P1-201ENST00000485187 316 ntBASIC17.29■□□□□ 0.36
PTPN18Q99952 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN18Q99952 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPN18Q99952 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PTPN18Q99952 AC005632.3-201ENST00000605544 308 ntBASIC17.29■□□□□ 0.36
PTPN18Q99952 AL161773.1-201ENST00000624845 863 ntBASIC17.29■□□□□ 0.36
PTPN18Q99952 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PTPN18Q99952 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPN18Q99952 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.29■□□□□ 0.36
PTPN18Q99952 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PTPN18Q99952 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PTPN18Q99952 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PTPN18Q99952 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN18Q99952 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN18Q99952 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN18Q99952 AC009090.5-201ENST00000624886 2285 ntBASIC17.28■□□□□ 0.36
PTPN18Q99952 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN18Q99952 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
PTPN18Q99952 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN18Q99952 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN18Q99952 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN18Q99952 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN18Q99952 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN18Q99952 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN18Q99952 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PTPN18Q99952 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN18Q99952 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPN18Q99952 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPN18Q99952 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN18Q99952 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.28■□□□□ 0.36
PTPN18Q99952 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN18Q99952 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPN18Q99952 AC009884.2-201ENST00000603110 324 ntBASIC17.28■□□□□ 0.36
PTPN18Q99952 MIR6858-201ENST00000620733 67 ntBASIC17.28■□□□□ 0.36
PTPN18Q99952 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPN18Q99952 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN18Q99952 AC006449.5-201ENST00000610658 2098 ntBASIC17.28■□□□□ 0.36
PTPN18Q99952 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN18Q99952 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN18Q99952 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN18Q99952 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN18Q99952 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN18Q99952 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN18Q99952 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN18Q99952 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN18Q99952 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN18Q99952 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN18Q99952 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN18Q99952 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.27■□□□□ 0.36
PTPN18Q99952 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.27■□□□□ 0.36
PTPN18Q99952 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN18Q99952 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN18Q99952 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN18Q99952 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN18Q99952 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN18Q99952 BUD31-205ENST00000456893 512 ntTSL 5 BASIC17.27■□□□□ 0.36
PTPN18Q99952 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.27■□□□□ 0.36
PTPN18Q99952 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN18Q99952 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PTPN18Q99952 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC17.27■□□□□ 0.36
PTPN18Q99952 PHBP15-201ENST00000574228 665 ntBASIC17.27■□□□□ 0.36
PTPN18Q99952 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC17.27■□□□□ 0.36
PTPN18Q99952 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC17.27■□□□□ 0.36
PTPN18Q99952 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PTPN18Q99952 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.27■□□□□ 0.36
PTPN18Q99952 MIR6720-201ENST00000611664 98 ntBASIC17.27■□□□□ 0.36
PTPN18Q99952 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN18Q99952 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN18Q99952 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.27■□□□□ 0.35
PTPN18Q99952 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN18Q99952 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms