Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.5■□□□□ 0.07
NDNQ99608 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.5■□□□□ 0.07
NDNQ99608 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.5■□□□□ 0.07
NDNQ99608 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 KLF2P3-201ENST00000451977 1087 ntBASIC15.5■□□□□ 0.07
NDNQ99608 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.5■□□□□ 0.07
NDNQ99608 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
NDNQ99608 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.5■□□□□ 0.07
NDNQ99608 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.5■□□□□ 0.07
NDNQ99608 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NDNQ99608 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.5■□□□□ 0.07
NDNQ99608 AC073592.8-201ENST00000624126 511 ntBASIC15.5■□□□□ 0.07
NDNQ99608 AC079781.4-201ENST00000641908 219 ntBASIC15.5■□□□□ 0.07
NDNQ99608 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.5■□□□□ 0.07
NDNQ99608 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NDNQ99608 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.5■□□□□ 0.07
NDNQ99608 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NDNQ99608 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NDNQ99608 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.49■□□□□ 0.07
NDNQ99608 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NDNQ99608 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.49■□□□□ 0.07
NDNQ99608 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.49■□□□□ 0.07
NDNQ99608 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.49■□□□□ 0.07
NDNQ99608 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.49■□□□□ 0.07
NDNQ99608 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.49■□□□□ 0.07
NDNQ99608 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NDNQ99608 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
NDNQ99608 AC010327.5-201ENST00000586923 3061 ntBASIC15.49■□□□□ 0.07
NDNQ99608 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NDNQ99608 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
NDNQ99608 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NDNQ99608 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NDNQ99608 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.49■□□□□ 0.07
NDNQ99608 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.49■□□□□ 0.07
NDNQ99608 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.49■□□□□ 0.07
NDNQ99608 RN7SL618P-201ENST00000477850 296 ntBASIC15.49■□□□□ 0.07
NDNQ99608 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.49■□□□□ 0.07
NDNQ99608 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.49■□□□□ 0.07
NDNQ99608 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.49■□□□□ 0.07
NDNQ99608 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.49■□□□□ 0.07
NDNQ99608 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NDNQ99608 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NDNQ99608 AC025678.2-201ENST00000562061 970 ntBASIC15.49■□□□□ 0.07
NDNQ99608 AC010336.2-201ENST00000564226 506 ntBASIC15.49■□□□□ 0.07
NDNQ99608 AC051619.7-201ENST00000568314 623 ntBASIC15.49■□□□□ 0.07
NDNQ99608 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.49■□□□□ 0.07
NDNQ99608 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.49■□□□□ 0.07
NDNQ99608 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.49■□□□□ 0.07
NDNQ99608 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.49■□□□□ 0.07
NDNQ99608 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.49■□□□□ 0.07
NDNQ99608 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.49■□□□□ 0.07
NDNQ99608 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.49■□□□□ 0.07
NDNQ99608 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.49■□□□□ 0.07
NDNQ99608 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
NDNQ99608 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NDNQ99608 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDNQ99608 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.49■□□□□ 0.07
NDNQ99608 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
NDNQ99608 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.48■□□□□ 0.07
NDNQ99608 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.48■□□□□ 0.07
NDNQ99608 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
NDNQ99608 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.48■□□□□ 0.07
NDNQ99608 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.48■□□□□ 0.07
NDNQ99608 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms