Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APH1AQ96BI3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.65□□□□□ -0.22
APH1AQ96BI3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
APH1AQ96BI3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APH1AQ96BI3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APH1AQ96BI3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APH1AQ96BI3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APH1AQ96BI3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APH1AQ96BI3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.65□□□□□ -0.22
APH1AQ96BI3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.65□□□□□ -0.22
APH1AQ96BI3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APH1AQ96BI3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 AP001063.1-201ENST00000568332 529 ntBASIC13.64□□□□□ -0.23
APH1AQ96BI3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 AC132938.2-201ENST00000579188 680 ntBASIC13.64□□□□□ -0.23
APH1AQ96BI3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 BX539320.1-201ENST00000623759 877 ntBASIC13.64□□□□□ -0.23
APH1AQ96BI3 AL591163.1-201ENST00000641757 987 ntBASIC13.64□□□□□ -0.23
APH1AQ96BI3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.64□□□□□ -0.23
APH1AQ96BI3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APH1AQ96BI3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 GIMAP3P-201ENST00000495150 836 ntBASIC13.63□□□□□ -0.23
APH1AQ96BI3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 AC015936.2-201ENST00000593177 259 ntBASIC13.63□□□□□ -0.23
APH1AQ96BI3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms