Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 AC142381.1-201ENST00000426099 345 ntBASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 AC009947.1-201ENST00000444350 727 ntBASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 FAAHP1-202ENST00000446499 1238 ntBASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 FAM197Y8-203ENST00000450145 560 ntBASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.31■□□□□ 0.04
CKAP2Q8WWK9 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 AC104457.1-201ENST00000401024 814 ntBASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 FAM215A-202ENST00000632077 792 ntBASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CKAP2Q8WWK9 AC027612.1-201ENST00000445234 2395 ntBASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 AC099521.3-201ENST00000624251 2938 ntBASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 EMBP1-201ENST00000458200 901 ntBASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 AC026979.3-201ENST00000607315 403 ntBASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms