Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CT55Q8WUE5 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CT55Q8WUE5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CT55Q8WUE5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CT55Q8WUE5 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CT55Q8WUE5 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CT55Q8WUE5 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CT55Q8WUE5 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CT55Q8WUE5 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.21□□□□□ -0.13
CT55Q8WUE5 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.21□□□□□ -0.13
CT55Q8WUE5 MESTP3-201ENST00000503460 968 ntBASIC14.21□□□□□ -0.13
CT55Q8WUE5 AC026434.2-201ENST00000506094 1078 ntBASIC14.21□□□□□ -0.13
CT55Q8WUE5 AC100850.1-201ENST00000506768 649 ntBASIC14.21□□□□□ -0.13
CT55Q8WUE5 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CT55Q8WUE5 AC005730.2-201ENST00000564549 1184 ntBASIC14.21□□□□□ -0.13
CT55Q8WUE5 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.21□□□□□ -0.13
CT55Q8WUE5 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.21□□□□□ -0.13
CT55Q8WUE5 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.21□□□□□ -0.13
CT55Q8WUE5 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CT55Q8WUE5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CT55Q8WUE5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.21□□□□□ -0.13
CT55Q8WUE5 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.21□□□□□ -0.13
CT55Q8WUE5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CT55Q8WUE5 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CT55Q8WUE5 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CT55Q8WUE5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CT55Q8WUE5 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CT55Q8WUE5 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.14
CT55Q8WUE5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.21□□□□□ -0.14
CT55Q8WUE5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CT55Q8WUE5 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CT55Q8WUE5 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CT55Q8WUE5 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
CT55Q8WUE5 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 AL513523.2-202ENST00000427283 2040 ntBASIC14.2□□□□□ -0.14
CT55Q8WUE5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 AL360270.3-201ENST00000609118 1348 ntBASIC14.2□□□□□ -0.14
CT55Q8WUE5 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 AL157414.3-201ENST00000624276 1954 ntBASIC14.2□□□□□ -0.14
CT55Q8WUE5 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 AC011270.2-201ENST00000624293 2550 ntBASIC14.2□□□□□ -0.14
CT55Q8WUE5 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 AL136309.1-201ENST00000403917 691 ntBASIC14.2□□□□□ -0.14
CT55Q8WUE5 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 EIF4HP1-201ENST00000453115 687 ntBASIC14.2□□□□□ -0.14
CT55Q8WUE5 AC044849.1-201ENST00000519737 1188 ntBASIC14.2□□□□□ -0.14
CT55Q8WUE5 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 NDUFV2P1-201ENST00000596415 907 ntBASIC14.2□□□□□ -0.14
CT55Q8WUE5 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.2□□□□□ -0.14
CT55Q8WUE5 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 AC084018.2-201ENST00000613093 2607 ntBASIC14.2□□□□□ -0.14
CT55Q8WUE5 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CT55Q8WUE5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CT55Q8WUE5 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CT55Q8WUE5 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CT55Q8WUE5 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.19□□□□□ -0.14
CT55Q8WUE5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CT55Q8WUE5 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CT55Q8WUE5 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CT55Q8WUE5 FKBP4P6-201ENST00000457486 1332 ntBASIC14.19□□□□□ -0.14
CT55Q8WUE5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CT55Q8WUE5 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CT55Q8WUE5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
CT55Q8WUE5 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CT55Q8WUE5 MST1L-201ENST00000442552 2185 ntBASIC14.19□□□□□ -0.14
CT55Q8WUE5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.19□□□□□ -0.14
CT55Q8WUE5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CT55Q8WUE5 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CT55Q8WUE5 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CT55Q8WUE5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.19□□□□□ -0.14
CT55Q8WUE5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CT55Q8WUE5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms