Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 CRYGEP-201ENST00000412192 528 ntBASIC13.37□□□□□ -0.27
BEST4Q8NFU0 IGLL3P-201ENST00000412472 434 ntBASIC13.37□□□□□ -0.27
BEST4Q8NFU0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 KRT18P67-201ENST00000432816 1264 ntBASIC13.37□□□□□ -0.27
BEST4Q8NFU0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 AL445228.2-201ENST00000605589 952 ntBASIC13.37□□□□□ -0.27
BEST4Q8NFU0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 AP001267.2-201ENST00000532619 2086 ntBASIC13.36□□□□□ -0.27
BEST4Q8NFU0 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 AC140658.5-201ENST00000438532 169 ntBASIC13.36□□□□□ -0.27
BEST4Q8NFU0 AC092910.1-201ENST00000482027 1129 ntBASIC13.36□□□□□ -0.27
BEST4Q8NFU0 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 AC007064.4-201ENST00000637740 555 ntBASIC13.36□□□□□ -0.27
BEST4Q8NFU0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms