Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 AC114501.2-201ENST00000439631 535 ntBASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 AC044860.1-202ENST00000559481 777 ntBASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LSMEM1Q8N8F7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.15□□□□□ -0.15
LSMEM1Q8N8F7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
LSMEM1Q8N8F7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
LSMEM1Q8N8F7 LINC00528-201ENST00000600723 2160 ntBASIC14.15□□□□□ -0.15
LSMEM1Q8N8F7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 TREML5P-201ENST00000421694 576 ntBASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 AC241585.1-201ENST00000433527 519 ntBASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 AC009477.1-201ENST00000452936 217 ntBASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms