Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN22Q8N7P3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN22Q8N7P3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN22Q8N7P3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN22Q8N7P3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN22Q8N7P3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 AL133267.1-201ENST00000398220 340 ntBASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 DNAJB3-202ENST00000449667 1266 ntBASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 AC109322.1-201ENST00000524499 1264 ntBASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 SNHG9-202ENST00000564014 471 ntBASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 AP000845.1-201ENST00000581677 2131 ntBASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 AC012508.2-201ENST00000567613 1472 ntBASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN22Q8N7P3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 KRT18P13-201ENST00000400056 1290 ntBASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 AP001059.3-201ENST00000619053 235 ntBASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLDN22Q8N7P3 LINC00628-201ENST00000628516 1289 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms