Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 AC018735.1-201ENST00000437208 1502 ntBASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 AC016629.1-201ENST00000596579 586 ntBASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 AC007663.3-201ENST00000609632 465 ntBASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 AC138649.2-201ENST00000615886 705 ntBASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SYNPOQ8N3V7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 COX5BP1-201ENST00000507622 393 ntBASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 AC105129.2-201ENST00000559536 390 ntBASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 ZACNP1-201ENST00000612259 710 ntBASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 KRT8P14-201ENST00000414254 1442 ntBASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms