Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.77■□□□□ 0.12
SIX5Q8N196 AC018892.3-201ENST00000623986 2499 ntBASIC15.77■□□□□ 0.12
SIX5Q8N196 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SIX5Q8N196 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIX5Q8N196 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIX5Q8N196 RNF216P1-203ENST00000404404 2427 ntBASIC15.77■□□□□ 0.12
SIX5Q8N196 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SIX5Q8N196 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIX5Q8N196 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIX5Q8N196 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIX5Q8N196 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SIX5Q8N196 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.77■□□□□ 0.12
SIX5Q8N196 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SIX5Q8N196 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SIX5Q8N196 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SIX5Q8N196 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SIX5Q8N196 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.77■□□□□ 0.12
SIX5Q8N196 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SIX5Q8N196 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.77■□□□□ 0.12
SIX5Q8N196 AL008707.1-201ENST00000422498 534 ntBASIC15.77■□□□□ 0.12
SIX5Q8N196 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.77■□□□□ 0.12
SIX5Q8N196 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.77■□□□□ 0.12
SIX5Q8N196 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.77■□□□□ 0.12
SIX5Q8N196 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SIX5Q8N196 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SIX5Q8N196 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SIX5Q8N196 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.77■□□□□ 0.11
SIX5Q8N196 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SIX5Q8N196 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
SIX5Q8N196 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.77■□□□□ 0.11
SIX5Q8N196 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SIX5Q8N196 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.77■□□□□ 0.11
SIX5Q8N196 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SIX5Q8N196 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.77■□□□□ 0.11
SIX5Q8N196 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.76■□□□□ 0.11
SIX5Q8N196 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SIX5Q8N196 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SIX5Q8N196 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 TUBBP5-203ENST00000508529 1334 ntBASIC15.76■□□□□ 0.11
SIX5Q8N196 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.76■□□□□ 0.11
SIX5Q8N196 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.76■□□□□ 0.11
SIX5Q8N196 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SIX5Q8N196 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.76■□□□□ 0.11
SIX5Q8N196 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
SIX5Q8N196 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.76■□□□□ 0.11
SIX5Q8N196 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.76■□□□□ 0.11
SIX5Q8N196 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.76■□□□□ 0.11
SIX5Q8N196 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SIX5Q8N196 PRKXP1-201ENST00000561423 1122 ntBASIC15.76■□□□□ 0.11
SIX5Q8N196 RN7SL774P-201ENST00000577467 290 ntBASIC15.76■□□□□ 0.11
SIX5Q8N196 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.76■□□□□ 0.11
SIX5Q8N196 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.76■□□□□ 0.11
SIX5Q8N196 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIX5Q8N196 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
SIX5Q8N196 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.75■□□□□ 0.11
SIX5Q8N196 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
SIX5Q8N196 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.75■□□□□ 0.11
SIX5Q8N196 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 LRRC59-203ENST00000576448 1531 ntBASIC15.75■□□□□ 0.11
SIX5Q8N196 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SIX5Q8N196 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.75■□□□□ 0.11
SIX5Q8N196 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.75■□□□□ 0.11
SIX5Q8N196 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.75■□□□□ 0.11
SIX5Q8N196 FAM8A4P-201ENST00000435433 1213 ntBASIC15.75■□□□□ 0.11
SIX5Q8N196 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.75■□□□□ 0.11
SIX5Q8N196 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.75■□□□□ 0.11
SIX5Q8N196 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms