Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 AC020907.1-201ENST00000616460 1350 ntBASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 MIR1908-201ENST00000410394 80 ntBASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 AC023310.3-201ENST00000557027 670 ntBASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 AC100756.1-201ENST00000562736 682 ntBASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 AC138749.3-201ENST00000567691 622 ntBASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 AC116165.1-201ENST00000611806 668 ntBASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC105Q8IYK2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 AC093726.1-201ENST00000608064 963 ntBASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 AC004461.2-201ENST00000629517 803 ntBASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 OR2I1P-209ENST00000641730 5365 ntBASIC16.65■□□□□ 0.26
CCDC105Q8IYK2 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.64■□□□□ 0.26
CCDC105Q8IYK2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CCDC105Q8IYK2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CCDC105Q8IYK2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 KRT43P-201ENST00000434019 910 ntBASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC105Q8IYK2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms