Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 AC106028.4-201ENST00000614509 607 ntBASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 SPTSSB-204ENST00000617024 1292 ntBASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.46■□□□□ 0.07
CRLF3Q8IUI8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
CRLF3Q8IUI8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CRLF3Q8IUI8 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CRLF3Q8IUI8 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CRLF3Q8IUI8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.46■□□□□ 0.06
CRLF3Q8IUI8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 RPL5P21-201ENST00000404620 815 ntBASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 HMGN1P19-201ENST00000436976 333 ntBASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 CYMP-203ENST00000474680 1263 ntBASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 HLA-J-203ENST00000494367 1087 ntBASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 AC109322.1-201ENST00000524499 1264 ntBASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CRLF3Q8IUI8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 KRT8P37-201ENST00000451609 1420 ntBASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 KRT18P32-201ENST00000424695 1287 ntBASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 SPCS2P4-201ENST00000436160 681 ntBASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 AC069335.1-201ENST00000489972 472 ntBASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 AC073389.1-201ENST00000595595 795 ntBASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 AC009093.7-201ENST00000623853 1223 ntBASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 LINC00628-201ENST00000628516 1289 ntBASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.44■□□□□ 0.06
CRLF3Q8IUI8 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms