Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE8Q86YQ8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE8Q86YQ8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.1■□□□□ 0.17
CPNE8Q86YQ8 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE8Q86YQ8 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 GAPDHP40-201ENST00000505218 1006 ntBASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CPNE8Q86YQ8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE8Q86YQ8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE8Q86YQ8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE8Q86YQ8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE8Q86YQ8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE8Q86YQ8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE8Q86YQ8 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE8Q86YQ8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE8Q86YQ8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE8Q86YQ8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 SAMD11P1-201ENST00000571429 661 ntBASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 NORAD-201ENST00000565493 5339 ntBASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE8Q86YQ8 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE8Q86YQ8 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE8Q86YQ8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CPNE8Q86YQ8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE8Q86YQ8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE8Q86YQ8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE8Q86YQ8 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE8Q86YQ8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CPNE8Q86YQ8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms