Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 CR383656.12-201ENST00000549567 513 ntBASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 AC124283.3-201ENST00000570869 594 ntBASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 AC104581.4-201ENST00000623126 3052 ntBASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 AC023908.3-201ENST00000564211 3047 ntBASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 CICP4-201ENST00000447359 2812 ntBASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 C1QBPP1-201ENST00000400117 770 ntBASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD3Q7Z3D4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.46■□□□□ 0.06
LYSMD3Q7Z3D4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
LYSMD3Q7Z3D4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
LYSMD3Q7Z3D4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
LYSMD3Q7Z3D4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.06
LYSMD3Q7Z3D4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LYSMD3Q7Z3D4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LYSMD3Q7Z3D4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 AC006486.2-201ENST00000624246 2199 ntBASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 AC133539.2-201ENST00000604757 467 ntBASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 AL645728.2-202ENST00000641679 227 ntBASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 AC023157.3-201ENST00000619086 2088 ntBASIC15.45■□□□□ 0.06
LYSMD3Q7Z3D4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms