Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC025580.3-201ENST00000617932 1424 ntBASIC10.93□□□□□ -0.66
RPL39P62891 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC10.93□□□□□ -0.66
RPL39P62891 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC10.93□□□□□ -0.66
RPL39P62891 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
RPL39P62891 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC10.93□□□□□ -0.66
RPL39P62891 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC10.93□□□□□ -0.66
RPL39P62891 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC10.93□□□□□ -0.66
RPL39P62891 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC10.93□□□□□ -0.66
RPL39P62891 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
RPL39P62891 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC10.93□□□□□ -0.66
RPL39P62891 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC10.93□□□□□ -0.66
RPL39P62891 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 FUK-202ENST00000378912 3925 ntTSL 2 BASIC10.93□□□□□ -0.66
RPL39P62891 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
RPL39P62891 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC10.93□□□□□ -0.66
RPL39P62891 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC10.93□□□□□ -0.66
RPL39P62891 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC10.93□□□□□ -0.66
RPL39P62891 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC10.93□□□□□ -0.66
RPL39P62891 AC105233.2-201ENST00000523697 349 ntBASIC10.93□□□□□ -0.66
RPL39P62891 AF228730.5-201ENST00000530288 346 ntBASIC10.93□□□□□ -0.66
RPL39P62891 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
RPL39P62891 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
RPL39P62891 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC10.93□□□□□ -0.66
RPL39P62891 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC10.93□□□□□ -0.66
RPL39P62891 AL607033.1-201ENST00000623900 1599 ntBASIC10.93□□□□□ -0.66
RPL39P62891 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 MPI-203ENST00000535694 1523 ntTSL 2 BASIC10.93□□□□□ -0.66
RPL39P62891 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
RPL39P62891 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
RPL39P62891 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC10.93□□□□□ -0.66
RPL39P62891 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
RPL39P62891 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
RPL39P62891 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC10.93□□□□□ -0.66
RPL39P62891 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 BCAR1-209ENST00000546196 1340 ntBASIC10.92□□□□□ -0.66
RPL39P62891 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC10.92□□□□□ -0.66
RPL39P62891 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 AC131212.3-201ENST00000624087 4219 ntBASIC10.92□□□□□ -0.66
RPL39P62891 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC10.92□□□□□ -0.66
RPL39P62891 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
RPL39P62891 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC10.92□□□□□ -0.66
RPL39P62891 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 AC098831.1-202ENST00000438821 336 ntBASIC10.92□□□□□ -0.66
RPL39P62891 AC009947.1-201ENST00000444350 727 ntBASIC10.92□□□□□ -0.66
RPL39P62891 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC10.92□□□□□ -0.66
RPL39P62891 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC10.92□□□□□ -0.66
RPL39P62891 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC10.92□□□□□ -0.66
RPL39P62891 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC10.92□□□□□ -0.66
RPL39P62891 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC10.92□□□□□ -0.66
RPL39P62891 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC10.92□□□□□ -0.66
RPL39P62891 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC10.92□□□□□ -0.66
RPL39P62891 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
RPL39P62891 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
RPL39P62891 AQP6-205ENST00000618286 829 ntTSL 5 BASIC10.92□□□□□ -0.66
RPL39P62891 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC10.92□□□□□ -0.66
RPL39P62891 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
RPL39P62891 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPL39P62891 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC10.92□□□□□ -0.66
RPL39P62891 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
RPL39P62891 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms